Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AL049641.1-201ENST00000441055 1948 ntBASIC3.5□□□□□ -1.85
SNX30Q5VWJ9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX30Q5VWJ9 AC017071.1-201ENST00000564407 2204 ntBASIC3.5□□□□□ -1.85
SNX30Q5VWJ9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 FGF7P2-201ENST00000332473 296 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 AC245291.1-201ENST00000419501 328 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 AC019097.1-201ENST00000424783 735 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 Z82210.1-201ENST00000440037 231 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 Z75741.1-201ENST00000446793 314 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 AC008264.1-201ENST00000447612 367 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 RPS27AP8-201ENST00000452665 445 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 AC013267.1-201ENST00000458227 267 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 snoU109.1-201ENST00000459339 135 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 RPL37P6-201ENST00000460682 294 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 RPL23AP67-201ENST00000465341 474 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 KCTD9P5-201ENST00000504141 1170 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 TTC39CP1-201ENST00000512513 755 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 TRAV28-201ENST00000557548 323 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 AC034105.3-201ENST00000565294 442 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 MIR4293-201ENST00000584305 78 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 U73023.1-201ENST00000603134 700 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 AC108747.1-201ENST00000609508 535 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 AC004696.1-201ENST00000614345 607 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 AL136313.1-201ENST00000624804 202 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 MTND5P27-201ENST00000428871 1720 ntBASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX30Q5VWJ9 ELL2P3-201ENST00000457883 1602 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 RNA5SP197-201ENST00000363357 119 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 RPL23AP69-201ENST00000431134 458 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 AC119618.1-201ENST00000434191 222 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 MTCO2P29-201ENST00000465212 189 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 AC021205.2-201ENST00000480069 347 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 APOOP4-201ENST00000513530 597 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 RNU6-927P-201ENST00000516199 100 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 MIR2276-201ENST00000516886 89 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 SNORA70.24-201ENST00000517233 118 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 AP002748.2-201ENST00000528671 348 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 RPL21P5-201ENST00000554662 472 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 RPL21P12-201ENST00000559810 515 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 MIR3682-201ENST00000581338 84 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 AL161729.4-201ENST00000604650 476 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 AC073114.1-201ENST00000612027 490 ntBASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.48□□□□□ -1.85
SNX30Q5VWJ9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 MIR148B-201ENST00000362252 99 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 RNY4P16-201ENST00000364768 94 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 MIR491-201ENST00000384877 84 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 RNU2-33P-201ENST00000410344 192 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 RNU4-47P-201ENST00000410876 114 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 Z85995.1-201ENST00000415547 335 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 HIGD1AP11-201ENST00000438361 280 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 AC140076.1-201ENST00000449897 361 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 HMGN1P18-201ENST00000457642 277 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 AC092798.1-201ENST00000458542 409 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 AC114797.1-201ENST00000514003 728 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 RNU2-10P-201ENST00000516375 211 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 SNORA64.4-201ENST00000516632 81 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 RN7SKP258-201ENST00000517151 304 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 AC104027.1-201ENST00000521887 300 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 AC107934.1-201ENST00000522215 217 ntBASIC3.47□□□□□ -1.85
SNX30Q5VWJ9 AC128657.1-201ENST00000549459 145 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms