Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.54□□□□□ -2
SMARCB1Q12824 CR383656.7-201ENST00000548164 174 ntBASIC2.54□□□□□ -2
SMARCB1Q12824 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.54□□□□□ -2
SMARCB1Q12824 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.54□□□□□ -2
SMARCB1Q12824 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.54□□□□□ -2
SMARCB1Q12824 BNIP3P40-201ENST00000596017 556 ntBASIC2.54□□□□□ -2
SMARCB1Q12824 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.54□□□□□ -2
SMARCB1Q12824 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.54□□□□□ -2
SMARCB1Q12824 AL022099.1-201ENST00000604551 712 ntBASIC2.54□□□□□ -2
SMARCB1Q12824 AC067747.1-201ENST00000608026 250 ntBASIC2.54□□□□□ -2
SMARCB1Q12824 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.54□□□□□ -2
SMARCB1Q12824 AC009159.1-201ENST00000618386 642 ntBASIC2.54□□□□□ -2
SMARCB1Q12824 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMARCB1Q12824 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMARCB1Q12824 PABPC1P9-201ENST00000426076 1612 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.53□□□□□ -2
SMARCB1Q12824 AC097714.1-201ENST00000511272 1647 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 OR4G11P-202ENST00000642116 1414 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 ZNF658B-202ENST00000615961 3375 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 SNORD114-30-201ENST00000364448 72 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 Y_RNA.465-201ENST00000384293 102 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 RNU6-882P-201ENST00000391025 103 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 RNA5SP425-201ENST00000410336 112 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 RN7SKP140-201ENST00000411196 284 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 RPS15AP38-201ENST00000413110 372 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.53□□□□□ -2
SMARCB1Q12824 AL139421.1-201ENST00000423010 169 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 COX7BP2-201ENST00000437976 242 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 EEF1E1P1-201ENST00000446998 430 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 PTENP1-201ENST00000447117 1215 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.53□□□□□ -2
SMARCB1Q12824 AC097493.1-201ENST00000463958 372 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.53□□□□□ -2
SMARCB1Q12824 HMGB1P36-201ENST00000487709 576 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 AC091951.3-201ENST00000504093 246 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.53□□□□□ -2
SMARCB1Q12824 AC104090.1-201ENST00000506341 1171 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 MLLT10P2-201ENST00000506434 249 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 AC026436.1-201ENST00000510537 270 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 AC008549.1-201ENST00000512900 643 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 RNU6-415P-201ENST00000516252 97 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 SNORA31.11-201ENST00000516528 139 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 AC022861.1-201ENST00000522981 663 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 AP001372.4-201ENST00000524889 472 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 AP001804.3-201ENST00000525146 880 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 OR4R1P-201ENST00000529879 463 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.53□□□□□ -2
SMARCB1Q12824 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.53□□□□□ -2
SMARCB1Q12824 OR4K7P-201ENST00000580232 945 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.53□□□□□ -2
SMARCB1Q12824 AC060766.3-201ENST00000591442 263 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.53□□□□□ -2
SMARCB1Q12824 AC106900.2-201ENST00000604994 317 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 AC006270.3-201ENST00000605967 1036 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 AC027449.1-201ENST00000608890 407 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.53□□□□□ -2
SMARCB1Q12824 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.53□□□□□ -2
SMARCB1Q12824 AP000776.1-201ENST00000530032 1663 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.53□□□□□ -2
SMARCB1Q12824 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
SMARCB1Q12824 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.52□□□□□ -2.01
SMARCB1Q12824 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SMARCB1Q12824 RNA5SP289-201ENST00000362332 137 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 RNU6-777P-201ENST00000364265 104 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 Y_RNA.311-201ENST00000365068 96 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 RNU1-73P-201ENST00000383971 164 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 RNU6-636P-201ENST00000384598 107 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 AL136372.1-201ENST00000403060 228 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 AL162578.1-201ENST00000406202 378 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.52□□□□□ -2.01
SMARCB1Q12824 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.52□□□□□ -2.01
SMARCB1Q12824 AC098826.1-201ENST00000433943 471 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 RPS25P9-201ENST00000435591 252 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 RAC1P7-201ENST00000445367 377 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 DUXAP8-207ENST00000456786 622 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 MTND1P16-201ENST00000465177 898 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 TRBV12-1-201ENST00000479785 344 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 AC108729.1-201ENST00000487812 947 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.52□□□□□ -2.01
SMARCB1Q12824 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.52□□□□□ -2.01
SMARCB1Q12824 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SMARCB1Q12824 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.52□□□□□ -2.01
SMARCB1Q12824 MYL12BP1-201ENST00000569826 507 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.52□□□□□ -2.01
SMARCB1Q12824 MIR5007-201ENST00000583098 95 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 AL450336.1-201ENST00000605180 586 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.52□□□□□ -2.01
SMARCB1Q12824 AC092106.3-201ENST00000611308 722 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 DUXAP10-204ENST00000612052 616 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SMARCB1Q12824 AL596245.1-201ENST00000618994 362 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 AC109809.1-201ENST00000619665 545 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 AL445264.1-201ENST00000621719 171 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 AC090772.4-201ENST00000623599 362 ntBASIC2.52□□□□□ -2.01
SMARCB1Q12824 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.52□□□□□ -2.01
SMARCB1Q12824 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.52□□□□□ -2.01
SMARCB1Q12824 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
SMARCB1Q12824 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMARCB1Q12824 DEFA7P-201ENST00000382676 285 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms