Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
NEK3P51956 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.92□□□□□ -1.78
NEK3P51956 AP004289.2-201ENST00000444413 1457 ntBASIC3.92□□□□□ -1.78
NEK3P51956 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
NEK3P51956 MTND5P26-201ENST00000426018 1752 ntBASIC3.91□□□□□ -1.78
NEK3P51956 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NEK3P51956 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.91□□□□□ -1.78
NEK3P51956 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.91□□□□□ -1.78
NEK3P51956 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.91□□□□□ -1.78
NEK3P51956 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEK3P51956 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEK3P51956 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEK3P51956 AL359837.1-201ENST00000381357 287 ntBASIC3.91□□□□□ -1.78
NEK3P51956 MIR325-201ENST00000385260 98 ntBASIC3.91□□□□□ -1.78
NEK3P51956 SNORA3.3-201ENST00000408712 125 ntBASIC3.91□□□□□ -1.78
NEK3P51956 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NEK3P51956 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.91□□□□□ -1.78
NEK3P51956 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.91□□□□□ -1.78
NEK3P51956 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.91□□□□□ -1.78
NEK3P51956 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.91□□□□□ -1.78
NEK3P51956 ISCA1P1-201ENST00000426679 387 ntBASIC3.91□□□□□ -1.78
NEK3P51956 ELOCP14-201ENST00000428070 331 ntBASIC3.91□□□□□ -1.78
NEK3P51956 MTCO2P11-201ENST00000431069 680 ntBASIC3.91□□□□□ -1.78
NEK3P51956 AL358934.1-201ENST00000432346 324 ntBASIC3.91□□□□□ -1.78
NEK3P51956 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.91□□□□□ -1.78
NEK3P51956 ELOCP7-201ENST00000439968 331 ntBASIC3.91□□□□□ -1.78
NEK3P51956 HMGN2P13-201ENST00000476476 274 ntBASIC3.91□□□□□ -1.78
NEK3P51956 PCBP2P3-201ENST00000509726 843 ntBASIC3.91□□□□□ -1.78
NEK3P51956 RNU6-1220P-201ENST00000517126 108 ntBASIC3.91□□□□□ -1.78
NEK3P51956 RANP9-201ENST00000519957 271 ntBASIC3.91□□□□□ -1.78
NEK3P51956 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.91□□□□□ -1.78
NEK3P51956 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.91□□□□□ -1.78
NEK3P51956 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.91□□□□□ -1.78
NEK3P51956 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.91□□□□□ -1.78
NEK3P51956 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.91□□□□□ -1.78
NEK3P51956 AC006504.3-201ENST00000586818 523 ntBASIC3.91□□□□□ -1.78
NEK3P51956 AL161798.1-201ENST00000604630 131 ntBASIC3.91□□□□□ -1.78
NEK3P51956 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NEK3P51956 AC091905.1-201ENST00000624400 311 ntBASIC3.91□□□□□ -1.78
NEK3P51956 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.91□□□□□ -1.78
NEK3P51956 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
NEK3P51956 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
NEK3P51956 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEK3P51956 AC233263.6-201ENST00000631132 1963 ntBASIC3.91□□□□□ -1.78
NEK3P51956 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEK3P51956 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NEK3P51956 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.9□□□□□ -1.78
NEK3P51956 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
NEK3P51956 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
NEK3P51956 UBE2L2-201ENST00000254302 429 ntBASIC3.9□□□□□ -1.79
NEK3P51956 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NEK3P51956 RNU6-188P-201ENST00000364207 107 ntBASIC3.9□□□□□ -1.79
NEK3P51956 RNU6-282P-201ENST00000365357 103 ntBASIC3.9□□□□□ -1.79
NEK3P51956 U1.1-201ENST00000384101 164 ntBASIC3.9□□□□□ -1.79
NEK3P51956 RNU6-190P-201ENST00000384154 102 ntBASIC3.9□□□□□ -1.79
NEK3P51956 HSPE1P8-201ENST00000406997 288 ntBASIC3.9□□□□□ -1.79
NEK3P51956 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.9□□□□□ -1.79
NEK3P51956 AL109913.1-201ENST00000421173 514 ntBASIC3.9□□□□□ -1.79
NEK3P51956 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.9□□□□□ -1.79
NEK3P51956 AC073464.1-201ENST00000429823 534 ntBASIC3.9□□□□□ -1.79
NEK3P51956 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.9□□□□□ -1.79
NEK3P51956 MTND1P34-201ENST00000438556 671 ntBASIC3.9□□□□□ -1.79
NEK3P51956 DNAJC19P4-201ENST00000440115 345 ntBASIC3.9□□□□□ -1.79
NEK3P51956 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.9□□□□□ -1.79
NEK3P51956 U3.44-201ENST00000458938 192 ntBASIC3.9□□□□□ -1.79
NEK3P51956 TRBV12-2-201ENST00000489763 344 ntBASIC3.9□□□□□ -1.79
NEK3P51956 HSPD1P15-201ENST00000505573 1122 ntBASIC3.9□□□□□ -1.79
NEK3P51956 AC116562.3-201ENST00000506136 177 ntBASIC3.9□□□□□ -1.79
NEK3P51956 SNORD59.2-201ENST00000516873 68 ntBASIC3.9□□□□□ -1.79
NEK3P51956 IGKV2-23-201ENST00000518729 323 ntBASIC3.9□□□□□ -1.79
NEK3P51956 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NEK3P51956 AC068587.5-201ENST00000528506 175 ntBASIC3.9□□□□□ -1.79
NEK3P51956 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.9□□□□□ -1.79
NEK3P51956 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.9□□□□□ -1.79
NEK3P51956 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.9□□□□□ -1.79
NEK3P51956 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.9□□□□□ -1.79
NEK3P51956 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.9□□□□□ -1.79
NEK3P51956 AC087499.8-201ENST00000578406 226 ntBASIC3.9□□□□□ -1.79
NEK3P51956 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.9□□□□□ -1.79
NEK3P51956 AC005609.4-201ENST00000625071 447 ntBASIC3.9□□□□□ -1.79
NEK3P51956 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.9□□□□□ -1.79
NEK3P51956 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NEK3P51956 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.9□□□□□ -1.79
NEK3P51956 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
NEK3P51956 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NEK3P51956 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NEK3P51956 AL161912.2-201ENST00000565707 3007 ntBASIC3.89□□□□□ -1.79
NEK3P51956 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NEK3P51956 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
NEK3P51956 RNU6-74P-201ENST00000384235 107 ntBASIC3.89□□□□□ -1.79
NEK3P51956 RNU6-456P-201ENST00000384493 107 ntBASIC3.89□□□□□ -1.79
NEK3P51956 Y_RNA.517-201ENST00000384551 106 ntBASIC3.89□□□□□ -1.79
NEK3P51956 RNU6-140P-201ENST00000384566 108 ntBASIC3.89□□□□□ -1.79
NEK3P51956 AL139397.2-201ENST00000404529 772 ntBASIC3.89□□□□□ -1.79
NEK3P51956 MTHFD2P2-201ENST00000407725 247 ntBASIC3.89□□□□□ -1.79
NEK3P51956 RPS12P24-201ENST00000412619 387 ntBASIC3.89□□□□□ -1.79
NEK3P51956 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.89□□□□□ -1.79
NEK3P51956 AC080125.1-201ENST00000414888 684 ntBASIC3.89□□□□□ -1.79
NEK3P51956 BTF3L4P3-201ENST00000418879 476 ntBASIC3.89□□□□□ -1.79
NEK3P51956 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms