Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNU6-277P-201ENST00000516272 106 ntBASIC4.6□□□□□ -1.67
MRE11P49959 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.6□□□□□ -1.67
MRE11P49959 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.6□□□□□ -1.67
MRE11P49959 AP003497.1-201ENST00000528472 562 ntBASIC4.6□□□□□ -1.67
MRE11P49959 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.6□□□□□ -1.67
MRE11P49959 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.6□□□□□ -1.67
MRE11P49959 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MRE11P49959 AL355375.2-201ENST00000574825 175 ntBASIC4.6□□□□□ -1.67
MRE11P49959 AC090615.1-201ENST00000577519 154 ntBASIC4.6□□□□□ -1.67
MRE11P49959 AC060771.1-201ENST00000582031 164 ntBASIC4.6□□□□□ -1.67
MRE11P49959 AL161729.3-201ENST00000603533 673 ntBASIC4.6□□□□□ -1.67
MRE11P49959 RNA5SP108-201ENST00000605921 117 ntBASIC4.6□□□□□ -1.67
MRE11P49959 uc_338.32-201ENST00000615087 172 ntBASIC4.6□□□□□ -1.67
MRE11P49959 AL591424.2-201ENST00000617023 128 ntBASIC4.6□□□□□ -1.67
MRE11P49959 AC009248.2-201ENST00000619826 254 ntBASIC4.6□□□□□ -1.67
MRE11P49959 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.6□□□□□ -1.67
MRE11P49959 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.6□□□□□ -1.67
MRE11P49959 ELL2P4-201ENST00000446870 1376 ntBASIC4.6□□□□□ -1.67
MRE11P49959 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
MRE11P49959 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
MRE11P49959 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.6□□□□□ -1.67
MRE11P49959 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.6□□□□□ -1.67
MRE11P49959 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MRE11P49959 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MRE11P49959 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.59□□□□□ -1.67
MRE11P49959 XIAPP3-201ENST00000312918 795 ntBASIC4.59□□□□□ -1.67
MRE11P49959 Y_RNA.162-201ENST00000363683 102 ntBASIC4.59□□□□□ -1.67
MRE11P49959 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MRE11P49959 Y_RNA.419-201ENST00000384041 102 ntBASIC4.59□□□□□ -1.67
MRE11P49959 MIR184-201ENST00000384962 84 ntBASIC4.59□□□□□ -1.67
MRE11P49959 HLFP1-201ENST00000402375 499 ntBASIC4.59□□□□□ -1.67
MRE11P49959 AL391417.1-201ENST00000404100 426 ntBASIC4.59□□□□□ -1.67
MRE11P49959 AL590004.1-201ENST00000405321 300 ntBASIC4.59□□□□□ -1.67
MRE11P49959 SRIP2-201ENST00000428470 166 ntBASIC4.59□□□□□ -1.67
MRE11P49959 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.59□□□□□ -1.67
MRE11P49959 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
MRE11P49959 RPS29P31-201ENST00000446147 164 ntBASIC4.59□□□□□ -1.67
MRE11P49959 SNORD108-201ENST00000459332 71 ntBASIC4.59□□□□□ -1.67
MRE11P49959 UBE2DNL-203ENST00000474922 222 ntBASIC4.59□□□□□ -1.67
MRE11P49959 AC078785.3-201ENST00000476607 425 ntBASIC4.59□□□□□ -1.67
MRE11P49959 RPS29P2-201ENST00000479278 136 ntBASIC4.59□□□□□ -1.67
MRE11P49959 AC021382.1-201ENST00000483523 359 ntBASIC4.59□□□□□ -1.67
MRE11P49959 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.59□□□□□ -1.67
MRE11P49959 EIF4EP3-201ENST00000498782 656 ntBASIC4.59□□□□□ -1.67
MRE11P49959 LARP1BP1-201ENST00000506036 1359 ntBASIC4.59□□□□□ -1.67
MRE11P49959 AC103851.1-201ENST00000506833 274 ntBASIC4.59□□□□□ -1.67
MRE11P49959 TMEM248P1-201ENST00000510579 951 ntBASIC4.59□□□□□ -1.67
MRE11P49959 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.59□□□□□ -1.67
MRE11P49959 AC112206.3-201ENST00000514578 389 ntBASIC4.59□□□□□ -1.67
MRE11P49959 RNA5SP73-201ENST00000516744 108 ntBASIC4.59□□□□□ -1.67
MRE11P49959 AC107953.1-201ENST00000522216 297 ntBASIC4.59□□□□□ -1.67
MRE11P49959 SUB1P1-201ENST00000524415 382 ntBASIC4.59□□□□□ -1.67
MRE11P49959 PSMA2P1-201ENST00000526365 646 ntBASIC4.59□□□□□ -1.67
MRE11P49959 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
MRE11P49959 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.59□□□□□ -1.67
MRE11P49959 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.59□□□□□ -1.67
MRE11P49959 HSPE1P5-201ENST00000561489 272 ntBASIC4.59□□□□□ -1.67
MRE11P49959 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.59□□□□□ -1.67
MRE11P49959 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.59□□□□□ -1.67
MRE11P49959 RMST_8.1-201ENST00000610287 165 ntBASIC4.59□□□□□ -1.67
MRE11P49959 Y_RNA.812-201ENST00000610788 101 ntBASIC4.59□□□□□ -1.67
MRE11P49959 uc_338.5-201ENST00000611839 155 ntBASIC4.59□□□□□ -1.67
MRE11P49959 Y_RNA.784-201ENST00000613803 101 ntBASIC4.59□□□□□ -1.67
MRE11P49959 Y_RNA.787-201ENST00000616522 101 ntBASIC4.59□□□□□ -1.67
MRE11P49959 Y_RNA.780-201ENST00000617336 101 ntBASIC4.59□□□□□ -1.67
MRE11P49959 Y_RNA.801-201ENST00000619005 101 ntBASIC4.59□□□□□ -1.67
MRE11P49959 AC090617.10-201ENST00000624308 134 ntBASIC4.59□□□□□ -1.67
MRE11P49959 AC011460.1-201ENST00000636268 1834 ntBASIC4.59□□□□□ -1.67
MRE11P49959 TPTEP1-208ENST00000636884 213 ntBASIC4.59□□□□□ -1.67
MRE11P49959 MIR1302-1-201ENST00000637932 143 ntBASIC4.59□□□□□ -1.67
MRE11P49959 AC009093.8-201ENST00000641769 292 ntBASIC4.59□□□□□ -1.67
MRE11P49959 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
MRE11P49959 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
MRE11P49959 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MRE11P49959 Z82217.1-201ENST00000625157 8149 ntBASIC4.58□□□□□ -1.68
MRE11P49959 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.58□□□□□ -1.68
MRE11P49959 AL645937.1-201ENST00000641739 1652 ntBASIC4.58□□□□□ -1.68
MRE11P49959 OR4G1P-203ENST00000641984 1631 ntBASIC4.58□□□□□ -1.68
MRE11P49959 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MRE11P49959 MTND5P1-201ENST00000445440 1375 ntBASIC4.58□□□□□ -1.68
MRE11P49959 RNA5SP72-201ENST00000364442 117 ntBASIC4.58□□□□□ -1.68
MRE11P49959 Y_RNA.326-201ENST00000365176 113 ntBASIC4.58□□□□□ -1.68
MRE11P49959 RNU6-606P-201ENST00000384721 111 ntBASIC4.58□□□□□ -1.68
MRE11P49959 RNU2-21P-201ENST00000410368 188 ntBASIC4.58□□□□□ -1.68
MRE11P49959 RNU6-1148P-201ENST00000410992 104 ntBASIC4.58□□□□□ -1.68
MRE11P49959 RAB9AP3-201ENST00000412737 573 ntBASIC4.58□□□□□ -1.68
MRE11P49959 AC004987.3-201ENST00000413879 771 ntBASIC4.58□□□□□ -1.68
MRE11P49959 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.58□□□□□ -1.68
MRE11P49959 AL159169.1-201ENST00000421119 127 ntBASIC4.58□□□□□ -1.68
MRE11P49959 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.58□□□□□ -1.68
MRE11P49959 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.58□□□□□ -1.68
MRE11P49959 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.58□□□□□ -1.68
MRE11P49959 DDX3P2-201ENST00000446138 111 ntBASIC4.58□□□□□ -1.68
MRE11P49959 MTND1P18-201ENST00000448191 573 ntBASIC4.58□□□□□ -1.68
MRE11P49959 RAB9AP1-201ENST00000449393 573 ntBASIC4.58□□□□□ -1.68
MRE11P49959 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.58□□□□□ -1.68
MRE11P49959 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.58□□□□□ -1.68
MRE11P49959 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.58□□□□□ -1.68
MRE11P49959 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.58□□□□□ -1.68
MRE11P49959 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms