Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RNU6-173P-201ENST00000364215 104 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SCN4AP35499 AL136133.1-201ENST00000413694 376 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 RPS15AP40-201ENST00000419621 391 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 MTCO3P1-205ENST00000422088 832 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 RAC1P8-201ENST00000427086 527 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.29□□□□□ -2.04
SCN4AP35499 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SCN4AP35499 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN4AP35499 AC104982.1-201ENST00000478775 574 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 AC104564.1-201ENST00000493028 407 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 AC134050.1-201ENST00000495088 933 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 AC093767.1-201ENST00000504523 156 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN4AP35499 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN4AP35499 MTCO3P44-201ENST00000510977 541 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN4AP35499 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN4AP35499 AC090666.1-201ENST00000578241 445 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 MIR5708-201ENST00000579723 85 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 AC103810.1-201ENST00000579873 453 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 AC231657.1-201ENST00000624313 397 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.29□□□□□ -2.04
SCN4AP35499 MTND4P1-201ENST00000457501 1466 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 AC005336.3-201ENST00000623833 2679 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 ZNF720P1-201ENST00000562403 1939 ntBASIC2.29□□□□□ -2.04
SCN4AP35499 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SCN4AP35499 AL121972.1-201ENST00000402023 252 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC007435.1-201ENST00000421086 415 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.28□□□□□ -2.04
SCN4AP35499 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SCN4AP35499 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.28□□□□□ -2.04
SCN4AP35499 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.28□□□□□ -2.04
SCN4AP35499 HMGN2P21-201ENST00000447764 270 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC004022.1-201ENST00000447766 1066 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AL353691.1-201ENST00000451332 387 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AL445669.2-201ENST00000454425 421 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 SNRPFP4-201ENST00000456366 242 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.28□□□□□ -2.04
SCN4AP35499 PNPLA4P1-201ENST00000458328 305 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC004062.1-201ENST00000509926 645 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 RNA5SP135-201ENST00000517019 125 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AP000889.2-201ENST00000532684 490 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.28□□□□□ -2.04
SCN4AP35499 CR383656.7-201ENST00000548164 174 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC090502.2-201ENST00000549267 280 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 TMF1P1-201ENST00000576058 373 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 MIR4509-3-201ENST00000578671 94 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AP001180.3-201ENST00000582221 145 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 MIR4509-2-201ENST00000583920 94 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 OR4G1P-201ENST00000588632 938 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC091057.2-201ENST00000602594 792 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC013562.2-201ENST00000611632 603 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 MIR4509-1-201ENST00000618224 94 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC123767.1-202ENST00000620407 817 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC004808.1-201ENST00000627671 721 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.28□□□□□ -2.04
SCN4AP35499 AC006927.4-201ENST00000639187 543 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.28□□□□□ -2.04
SCN4AP35499 AC244517.1-201ENST00000606030 2086 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 RNU6-921P-201ENST00000384361 107 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 SNORD116-23-201ENST00000384645 92 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 MIR649-201ENST00000384843 97 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SCN4AP35499 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.28□□□□□ -2.04
SCN4AP35499 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.28□□□□□ -2.04
SCN4AP35499 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.28□□□□□ -2.04
SCN4AP35499 MTCO3P30-201ENST00000426425 670 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 HSFY7P-201ENST00000432672 318 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 ATP5F1P1-201ENST00000433775 569 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 HSFY8P-201ENST00000437934 318 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.28□□□□□ -2.04
SCN4AP35499 HSFY5P-201ENST00000453726 309 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SCN4AP35499 NAP1L1P3-201ENST00000462291 880 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC104164.3-201ENST00000467363 1258 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 RPL37P25-201ENST00000507308 276 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC016065.2-201ENST00000514530 444 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC112206.4-201ENST00000515142 405 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 RNU6-250P-201ENST00000516958 103 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 AC021451.1-201ENST00000523498 1129 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 DEFB130C-202ENST00000530001 230 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 MIR3690-201ENST00000580266 75 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
SCN4AP35499 SNHG22-203ENST00000617833 660 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.28□□□□□ -2.04
SCN4AP35499 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.28□□□□□ -2.04
SCN4AP35499 AL445984.1-201ENST00000637834 659 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 MKKS-204ENST00000639674 192 ntBASIC2.28□□□□□ -2.04
SCN4AP35499 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SCN4AP35499 Y_RNA.311-201ENST00000365068 96 ntBASIC2.27□□□□□ -2.05
SCN4AP35499 RNU1-101P-201ENST00000391171 127 ntBASIC2.27□□□□□ -2.05
SCN4AP35499 AL138880.1-201ENST00000405824 642 ntBASIC2.27□□□□□ -2.05
SCN4AP35499 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN4AP35499 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.27□□□□□ -2.05
SCN4AP35499 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.27□□□□□ -2.05
SCN4AP35499 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN4AP35499 AP000852.1-201ENST00000472460 573 ntBASIC2.27□□□□□ -2.05
SCN4AP35499 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms