Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC136443.5-201ENST00000603741 370 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 AL391834.1-201ENST00000609609 560 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 AC020658.4-201ENST00000613987 684 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 AC008121.3-201ENST00000618726 433 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.2□□□□□ -2.22
HMGA1P17096 RNA5SP391-201ENST00000363456 119 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 RNU1-93P-201ENST00000364704 169 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 SNORD114-22-201ENST00000365423 72 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 AC016769.3-201ENST00000396562 315 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 AL033519.2-201ENST00000403958 392 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 PTGES3P2-201ENST00000407942 482 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.19□□□□□ -2.22
HMGA1P17096 RPL21P32-201ENST00000419877 477 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 ARF4P4-201ENST00000439608 520 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HMGA1P17096 AL500527.1-201ENST00000448532 255 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 RPL31P20-201ENST00000449593 360 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 TRBV8-1-201ENST00000481590 279 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.19□□□□□ -2.22
HMGA1P17096 AC008885.2-201ENST00000509506 930 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 SNORA31.18-201ENST00000517043 134 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.19□□□□□ -2.22
HMGA1P17096 AC109809.1-201ENST00000619665 545 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 AL359740.1-201ENST00000624340 592 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 AC068620.4-201ENST00000636730 1182 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 CCT4P2-201ENST00000233836 1548 ntBASIC1.19□□□□□ -2.22
HMGA1P17096 SNORD114-27-201ENST00000363766 70 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 Y_RNA.191-201ENST00000363972 113 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 SNORA1.3-201ENST00000384676 136 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 MT-TP-201ENST00000387461 68 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 U8.14-201ENST00000390843 143 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 RNU6-193P-201ENST00000410977 107 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.18□□□□□ -2.22
HMGA1P17096 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGA1P17096 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HMGA1P17096 RNF2P1-201ENST00000442955 1010 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGA1P17096 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.18□□□□□ -2.22
HMGA1P17096 AC022447.3-201ENST00000506865 495 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 NDUFB4P2-201ENST00000509515 391 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 AC004062.1-201ENST00000509926 645 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.18□□□□□ -2.22
HMGA1P17096 AC093770.1-201ENST00000511559 571 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGA1P17096 AP003717.3-201ENST00000544832 1180 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 AC040174.2-201ENST00000602701 465 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 AC005296.1-201ENST00000616145 209 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 STMN1P1-201ENST00000617809 440 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 MIR6767-201ENST00000637302 66 ntBASIC1.18□□□□□ -2.22
HMGA1P17096 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMGA1P17096 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGA1P17096 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGA1P17096 RPS4XP3-201ENST00000398541 413 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGA1P17096 SNRPEP10-201ENST00000420249 274 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 XKRYP1-201ENST00000423438 492 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 XKRYP2-201ENST00000432915 492 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGA1P17096 SNRPGP6-201ENST00000451124 220 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 SNRPGP9-201ENST00000456025 225 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 AC055855.1-201ENST00000489563 579 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 AC034244.1-201ENST00000507687 207 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 AP000907.2-201ENST00000530827 353 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 AC008015.1-201ENST00000555505 465 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 MIR4287-201ENST00000579398 78 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 MIR4452-201ENST00000583004 71 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 MIR4295-201ENST00000585286 85 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.17□□□□□ -2.22
HMGA1P17096 AC092474.3-201ENST00000603022 568 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 AL355297.2-201ENST00000604792 129 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGA1P17096 OR4G1P-203ENST00000641984 1631 ntBASIC1.17□□□□□ -2.22
HMGA1P17096 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.16□□□□□ -2.22
HMGA1P17096 AC008669.1-201ENST00000565823 2178 ntBASIC1.16□□□□□ -2.22
HMGA1P17096 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HMGA1P17096 Y_RNA.116-201ENST00000363292 103 ntBASIC1.16□□□□□ -2.22
HMGA1P17096 RNU6-1331P-201ENST00000363658 106 ntBASIC1.16□□□□□ -2.22
HMGA1P17096 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HMGA1P17096 RNU6-1080P-201ENST00000383982 107 ntBASIC1.16□□□□□ -2.22
HMGA1P17096 MTND4P11-201ENST00000417020 1058 ntBASIC1.16□□□□□ -2.22
HMGA1P17096 AC093155.1-201ENST00000440164 826 ntBASIC1.16□□□□□ -2.22
HMGA1P17096 HMGN2P10-201ENST00000448085 265 ntBASIC1.16□□□□□ -2.22
HMGA1P17096 CALM1P2-201ENST00000452941 448 ntBASIC1.16□□□□□ -2.22
HMGA1P17096 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGA1P17096 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.16□□□□□ -2.22
HMGA1P17096 AC008526.1-201ENST00000509149 338 ntBASIC1.16□□□□□ -2.22
HMGA1P17096 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.16□□□□□ -2.22
HMGA1P17096 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.16□□□□□ -2.22
HMGA1P17096 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGA1P17096 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.16□□□□□ -2.22
HMGA1P17096 AC025918.2-201ENST00000558683 763 ntBASIC1.16□□□□□ -2.22
HMGA1P17096 AC078899.2-201ENST00000595282 212 ntBASIC1.16□□□□□ -2.22
HMGA1P17096 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.16□□□□□ -2.22
HMGA1P17096 AC011330.2-201ENST00000621680 635 ntBASIC1.16□□□□□ -2.22
HMGA1P17096 AC095031.1-201ENST00000623685 672 ntBASIC1.16□□□□□ -2.22
HMGA1P17096 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.16□□□□□ -2.22
HMGA1P17096 MKKS-204ENST00000639674 192 ntBASIC1.16□□□□□ -2.22
HMGA1P17096 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HMGA1P17096 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.15□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms