Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.96□□□□□ -1.78
RHOP08100 AC128657.1-201ENST00000549459 145 ntBASIC3.96□□□□□ -1.78
RHOP08100 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.96□□□□□ -1.78
RHOP08100 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.96□□□□□ -1.78
RHOP08100 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.96□□□□□ -1.78
RHOP08100 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.96□□□□□ -1.78
RHOP08100 AC044792.1-201ENST00000593294 196 ntBASIC3.96□□□□□ -1.78
RHOP08100 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.96□□□□□ -1.78
RHOP08100 AC093838.1-201ENST00000613014 469 ntBASIC3.96□□□□□ -1.78
RHOP08100 AL603758.1-201ENST00000618654 241 ntBASIC3.96□□□□□ -1.78
RHOP08100 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.96□□□□□ -1.78
RHOP08100 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RHOP08100 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RHOP08100 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
RHOP08100 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RHOP08100 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RHOP08100 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RHOP08100 NACAP2-201ENST00000318548 624 ntBASIC3.95□□□□□ -1.78
RHOP08100 RNA5SP72-201ENST00000364442 117 ntBASIC3.95□□□□□ -1.78
RHOP08100 SNORA9-201ENST00000384215 133 ntBASIC3.95□□□□□ -1.78
RHOP08100 AL356432.1-201ENST00000405809 419 ntBASIC3.95□□□□□ -1.78
RHOP08100 AL162578.1-201ENST00000406202 378 ntBASIC3.95□□□□□ -1.78
RHOP08100 RN7SKP32-201ENST00000410167 303 ntBASIC3.95□□□□□ -1.78
RHOP08100 RPS7P15-201ENST00000415804 584 ntBASIC3.95□□□□□ -1.78
RHOP08100 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.95□□□□□ -1.78
RHOP08100 RPS6P12-201ENST00000432491 726 ntBASIC3.95□□□□□ -1.78
RHOP08100 AL590399.6-201ENST00000446396 307 ntBASIC3.95□□□□□ -1.78
RHOP08100 RPS3AP46-201ENST00000448352 682 ntBASIC3.95□□□□□ -1.78
RHOP08100 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.95□□□□□ -1.78
RHOP08100 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.95□□□□□ -1.78
RHOP08100 MRPS17P3-201ENST00000465453 385 ntBASIC3.95□□□□□ -1.78
RHOP08100 RN7SKP219-201ENST00000516825 296 ntBASIC3.95□□□□□ -1.78
RHOP08100 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RHOP08100 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.95□□□□□ -1.78
RHOP08100 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.95□□□□□ -1.78
RHOP08100 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.95□□□□□ -1.78
RHOP08100 CR383656.7-201ENST00000548164 174 ntBASIC3.95□□□□□ -1.78
RHOP08100 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.95□□□□□ -1.78
RHOP08100 MTND6P33-201ENST00000571794 183 ntBASIC3.95□□□□□ -1.78
RHOP08100 MIR4293-201ENST00000584305 78 ntBASIC3.95□□□□□ -1.78
RHOP08100 AC006254.3-201ENST00000603353 884 ntBASIC3.95□□□□□ -1.78
RHOP08100 AL139395.1-201ENST00000603662 160 ntBASIC3.95□□□□□ -1.78
RHOP08100 AL132765.2-201ENST00000610812 351 ntBASIC3.95□□□□□ -1.78
RHOP08100 MIR7154-201ENST00000620673 73 ntBASIC3.95□□□□□ -1.78
RHOP08100 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.95□□□□□ -1.78
RHOP08100 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.95□□□□□ -1.78
RHOP08100 AC100810.6-201ENST00000638068 285 ntBASIC3.95□□□□□ -1.78
RHOP08100 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.95□□□□□ -1.78
RHOP08100 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.95□□□□□ -1.78
RHOP08100 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RHOP08100 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RHOP08100 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.95□□□□□ -1.78
RHOP08100 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RHOP08100 AL157700.1-201ENST00000561973 1432 ntBASIC3.95□□□□□ -1.78
RHOP08100 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.94□□□□□ -1.78
RHOP08100 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.94□□□□□ -1.78
RHOP08100 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RHOP08100 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RHOP08100 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RHOP08100 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
RHOP08100 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RHOP08100 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RHOP08100 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RHOP08100 AL109755.1-201ENST00000401791 649 ntBASIC3.94□□□□□ -1.78
RHOP08100 AL136372.1-201ENST00000403060 228 ntBASIC3.94□□□□□ -1.78
RHOP08100 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.94□□□□□ -1.78
RHOP08100 RN7SKP177-201ENST00000410567 355 ntBASIC3.94□□□□□ -1.78
RHOP08100 RNU2-39P-201ENST00000410604 198 ntBASIC3.94□□□□□ -1.78
RHOP08100 RNA5SP104-201ENST00000410989 118 ntBASIC3.94□□□□□ -1.78
RHOP08100 RNU6-516P-201ENST00000411381 104 ntBASIC3.94□□□□□ -1.78
RHOP08100 ATP5A1P2-201ENST00000412323 255 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC009161.1-201ENST00000417306 376 ntBASIC3.94□□□□□ -1.78
RHOP08100 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.94□□□□□ -1.78
RHOP08100 MRPS18BP2-201ENST00000434310 759 ntBASIC3.94□□□□□ -1.78
RHOP08100 RPS3AP12-201ENST00000443616 753 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.94□□□□□ -1.78
RHOP08100 HMGB3P30-201ENST00000457863 606 ntBASIC3.94□□□□□ -1.78
RHOP08100 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.94□□□□□ -1.78
RHOP08100 snoU13.3-201ENST00000459441 104 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC006512.1-201ENST00000468816 291 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC025554.1-201ENST00000505641 188 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC116562.3-201ENST00000506136 177 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.94□□□□□ -1.78
RHOP08100 RNU6-64P-201ENST00000517119 105 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC100870.1-201ENST00000522035 505 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.94□□□□□ -1.78
RHOP08100 AC068587.5-201ENST00000528506 175 ntBASIC3.94□□□□□ -1.78
RHOP08100 AP005435.4-201ENST00000529514 284 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC243972.3-201ENST00000539655 198 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC023050.3-201ENST00000541142 333 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.94□□□□□ -1.78
RHOP08100 BNIP3P6-201ENST00000549284 499 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC037471.2-201ENST00000564941 598 ntBASIC3.94□□□□□ -1.78
RHOP08100 MIR4775-201ENST00000581168 75 ntBASIC3.94□□□□□ -1.78
RHOP08100 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.94□□□□□ -1.78
RHOP08100 U73479.1-201ENST00000618062 168 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC091953.5-201ENST00000622919 233 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC119674.1-207ENST00000641355 633 ntBASIC3.94□□□□□ -1.78
RHOP08100 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.94□□□□□ -1.78
RHOP08100 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms