Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CPSF4O95639 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.9□□□□□ -2.11
CPSF4O95639 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.9□□□□□ -2.11
CPSF4O95639 AC009063.1-201ENST00000563342 702 ntBASIC1.9□□□□□ -2.11
CPSF4O95639 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.9□□□□□ -2.11
CPSF4O95639 AC009163.5-201ENST00000575421 637 ntBASIC1.9□□□□□ -2.11
CPSF4O95639 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.9□□□□□ -2.11
CPSF4O95639 AL158050.2-201ENST00000605336 568 ntBASIC1.9□□□□□ -2.11
CPSF4O95639 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.9□□□□□ -2.11
CPSF4O95639 AC245517.5-201ENST00000611529 162 ntBASIC1.9□□□□□ -2.11
CPSF4O95639 AL138880.2-201ENST00000616214 239 ntBASIC1.9□□□□□ -2.11
CPSF4O95639 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.9□□□□□ -2.11
CPSF4O95639 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.9□□□□□ -2.11
CPSF4O95639 AC010680.1-201ENST00000590024 3590 ntBASIC1.9□□□□□ -2.11
CPSF4O95639 MTND4P35-201ENST00000604257 1375 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 DEFB108F-201ENST00000344638 222 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 RNU6-28P-201ENST00000362378 107 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 RNU6-525P-201ENST00000363685 104 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.89□□□□□ -2.11
CPSF4O95639 SNORA1.3-201ENST00000384676 136 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CPSF4O95639 RPS3AP24-201ENST00000407896 734 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.89□□□□□ -2.11
CPSF4O95639 TPMTP2-201ENST00000414372 726 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 MTCO2P5-201ENST00000422621 426 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 TMEM167AP1-201ENST00000423409 219 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 NDUFB4P6-201ENST00000436819 366 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 THAP5P1-201ENST00000439089 262 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 AL121871.1-201ENST00000443413 436 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.89□□□□□ -2.11
CPSF4O95639 AL358794.1-201ENST00000445689 381 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
CPSF4O95639 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.89□□□□□ -2.11
CPSF4O95639 MTATP6P14-201ENST00000455189 673 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 RNU7-136P-201ENST00000458819 69 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 AC104164.3-201ENST00000467363 1258 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.89□□□□□ -2.11
CPSF4O95639 AC008413.1-201ENST00000511864 177 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 IGLV3-17-201ENST00000519099 244 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 MTND2P7-201ENST00000521337 640 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 DEFB108D-201ENST00000527787 222 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.89□□□□□ -2.11
CPSF4O95639 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.89□□□□□ -2.11
CPSF4O95639 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CPSF4O95639 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.89□□□□□ -2.11
CPSF4O95639 MIR5089-201ENST00000580047 84 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 MIR5194-201ENST00000582634 120 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 SNRPGP19-201ENST00000603826 189 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 HSPE1P7-201ENST00000604681 321 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 AP000254.1-201ENST00000609934 520 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 DUXAP10-204ENST00000612052 616 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 AC011330.2-201ENST00000621680 635 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.89□□□□□ -2.11
CPSF4O95639 AL356473.1-201ENST00000406203 1408 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.89□□□□□ -2.11
CPSF4O95639 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.89□□□□□ -2.11
CPSF4O95639 AC099654.7-201ENST00000635788 2127 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CPSF4O95639 AC138915.1-201ENST00000565427 1685 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CPSF4O95639 OR56A5-201ENST00000340110 738 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 RNU4-82P-201ENST00000362443 140 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 RNA5SP139-201ENST00000364340 117 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 RNU6-343P-201ENST00000364709 104 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 Y_RNA.510-201ENST00000384511 114 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 SNORA64-201ENST00000384674 134 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 RNU6-952P-201ENST00000391164 108 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 MTND1P23-201ENST00000416931 372 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.88□□□□□ -2.11
CPSF4O95639 RPL27AP8-201ENST00000424277 446 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 RPL7P37-201ENST00000425095 738 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 AC092573.2-201ENST00000434546 243 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 MTND4P6-201ENST00000438297 472 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 CBWD4P-201ENST00000445695 655 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 AL592447.1-201ENST00000447592 540 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.88□□□□□ -2.11
CPSF4O95639 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CPSF4O95639 AC135721.1-201ENST00000497954 479 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.88□□□□□ -2.11
CPSF4O95639 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.88□□□□□ -2.11
CPSF4O95639 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.88□□□□□ -2.11
CPSF4O95639 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CPSF4O95639 CASP1P1-201ENST00000526345 212 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 AC007115.1-201ENST00000546853 234 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.88□□□□□ -2.11
CPSF4O95639 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CPSF4O95639 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.88□□□□□ -2.11
CPSF4O95639 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.88□□□□□ -2.11
CPSF4O95639 AC090615.1-201ENST00000577519 154 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.88□□□□□ -2.11
CPSF4O95639 AC105224.1-201ENST00000587055 421 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.88□□□□□ -2.11
CPSF4O95639 BNIP3P26-201ENST00000600827 554 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 U73023.1-201ENST00000603134 700 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 AC021749.1-201ENST00000604322 607 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 AC019159.1-201ENST00000605094 187 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 AL121652.1-201ENST00000608851 448 ntBASIC1.88□□□□□ -2.11
CPSF4O95639 AL590099.1-201ENST00000615276 138 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms