Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.91
SIX3O95343 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SIX3O95343 AC022336.2-201ENST00000568966 2538 ntBASIC3.09□□□□□ -1.91
SIX3O95343 Y_RNA.560-201ENST00000384689 102 ntBASIC3.09□□□□□ -1.91
SIX3O95343 HMGB1P27-201ENST00000431429 603 ntBASIC3.09□□□□□ -1.91
SIX3O95343 AL049734.2-201ENST00000441066 616 ntBASIC3.09□□□□□ -1.91
SIX3O95343 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.09□□□□□ -1.91
SIX3O95343 ZNF114P1-201ENST00000453500 292 ntBASIC3.09□□□□□ -1.91
SIX3O95343 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SIX3O95343 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.09□□□□□ -1.91
SIX3O95343 SETP11-201ENST00000473027 690 ntBASIC3.09□□□□□ -1.91
SIX3O95343 AL135752.1-201ENST00000479477 471 ntBASIC3.09□□□□□ -1.91
SIX3O95343 AL160314.1-201ENST00000490836 438 ntBASIC3.09□□□□□ -1.91
SIX3O95343 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SIX3O95343 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.09□□□□□ -1.91
SIX3O95343 Y_RNA.676-201ENST00000516393 96 ntBASIC3.09□□□□□ -1.91
SIX3O95343 RNU6-64P-201ENST00000517119 105 ntBASIC3.09□□□□□ -1.91
SIX3O95343 AL356432.3-201ENST00000568952 465 ntBASIC3.09□□□□□ -1.91
SIX3O95343 AC068135.2-201ENST00000569293 1028 ntBASIC3.09□□□□□ -1.91
SIX3O95343 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.09□□□□□ -1.91
SIX3O95343 AC090616.2-202ENST00000584248 222 ntBASIC3.09□□□□□ -1.91
SIX3O95343 AC008751.2-201ENST00000597885 980 ntBASIC3.09□□□□□ -1.91
SIX3O95343 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.09□□□□□ -1.91
SIX3O95343 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.09□□□□□ -1.91
SIX3O95343 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.09□□□□□ -1.91
SIX3O95343 AP002791.1-201ENST00000623291 381 ntBASIC3.09□□□□□ -1.91
SIX3O95343 AC079416.3-201ENST00000624479 549 ntBASIC3.09□□□□□ -1.91
SIX3O95343 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.09□□□□□ -1.91
SIX3O95343 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SIX3O95343 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.09□□□□□ -1.92
SIX3O95343 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
SIX3O95343 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.09□□□□□ -1.92
SIX3O95343 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.92
SIX3O95343 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SIX3O95343 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.09□□□□□ -1.92
SIX3O95343 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SIX3O95343 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SIX3O95343 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.08□□□□□ -1.92
SIX3O95343 RNU1-105P-201ENST00000363470 161 ntBASIC3.08□□□□□ -1.92
SIX3O95343 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SIX3O95343 RNU6-140P-201ENST00000384566 108 ntBASIC3.08□□□□□ -1.92
SIX3O95343 MIR767-201ENST00000390228 109 ntBASIC3.08□□□□□ -1.92
SIX3O95343 MTCYBP36-201ENST00000404146 440 ntBASIC3.08□□□□□ -1.92
SIX3O95343 RNU2-33P-201ENST00000410344 192 ntBASIC3.08□□□□□ -1.92
SIX3O95343 RNU2-62P-201ENST00000410868 191 ntBASIC3.08□□□□□ -1.92
SIX3O95343 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.08□□□□□ -1.92
SIX3O95343 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.08□□□□□ -1.92
SIX3O95343 AC099548.1-201ENST00000421443 426 ntBASIC3.08□□□□□ -1.92
SIX3O95343 DPPA2P1-201ENST00000428060 556 ntBASIC3.08□□□□□ -1.92
SIX3O95343 AC109583.1-201ENST00000432156 268 ntBASIC3.08□□□□□ -1.92
SIX3O95343 AC005019.1-201ENST00000436455 431 ntBASIC3.08□□□□□ -1.92
SIX3O95343 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.08□□□□□ -1.92
SIX3O95343 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX3O95343 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX3O95343 RPS12P18-201ENST00000442381 270 ntBASIC3.08□□□□□ -1.92
SIX3O95343 RPS3AP22-201ENST00000488297 769 ntBASIC3.08□□□□□ -1.92
SIX3O95343 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX3O95343 RAC1P5-201ENST00000512182 576 ntBASIC3.08□□□□□ -1.92
SIX3O95343 AC010265.1-201ENST00000513509 211 ntBASIC3.08□□□□□ -1.92
SIX3O95343 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.08□□□□□ -1.92
SIX3O95343 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX3O95343 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX3O95343 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.08□□□□□ -1.92
SIX3O95343 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.08□□□□□ -1.92
SIX3O95343 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.08□□□□□ -1.92
SIX3O95343 AMZ2P1-203ENST00000565833 850 ntBASIC3.08□□□□□ -1.92
SIX3O95343 DPPA3P3-201ENST00000603842 430 ntBASIC3.08□□□□□ -1.92
SIX3O95343 AL161729.4-201ENST00000604650 476 ntBASIC3.08□□□□□ -1.92
SIX3O95343 AF246928.1-201ENST00000623768 87 ntBASIC3.08□□□□□ -1.92
SIX3O95343 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.08□□□□□ -1.92
SIX3O95343 AL445523.1-201ENST00000451184 1362 ntBASIC3.08□□□□□ -1.92
SIX3O95343 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
SIX3O95343 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.08□□□□□ -1.92
SIX3O95343 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SIX3O95343 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIX3O95343 MTND5P27-201ENST00000428871 1720 ntBASIC3.07□□□□□ -1.92
SIX3O95343 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.07□□□□□ -1.92
SIX3O95343 Y_RNA.46-201ENST00000362695 102 ntBASIC3.07□□□□□ -1.92
SIX3O95343 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SIX3O95343 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX3O95343 SNORA46-201ENST00000384762 135 ntBASIC3.07□□□□□ -1.92
SIX3O95343 RPL21P3-201ENST00000395517 478 ntBASIC3.07□□□□□ -1.92
SIX3O95343 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX3O95343 AL357075.1-201ENST00000404107 726 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AC078974.1-201ENST00000411597 223 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AC245054.2-201ENST00000415639 319 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX3O95343 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX3O95343 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.07□□□□□ -1.92
SIX3O95343 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.07□□□□□ -1.92
SIX3O95343 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX3O95343 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX3O95343 TRIAP1P1-201ENST00000427062 225 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AC244035.1-201ENST00000430042 390 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AL365184.2-201ENST00000431139 435 ntBASIC3.07□□□□□ -1.92
SIX3O95343 TIMM9P1-201ENST00000436122 256 ntBASIC3.07□□□□□ -1.92
SIX3O95343 TRIM60P18-201ENST00000441518 828 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.07□□□□□ -1.92
SIX3O95343 AC146507.2-201ENST00000460608 476 ntBASIC3.07□□□□□ -1.92
SIX3O95343 AP002884.2-201ENST00000471647 395 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms