Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 Y_RNA.31-201ENST00000362574 102 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 RNU6-1252P-201ENST00000363054 104 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 RNU6-1309P-201ENST00000363305 108 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 RNU6-196P-201ENST00000384315 107 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 RNU2-39P-201ENST00000410604 198 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 RPL17P36-201ENST00000420302 549 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 AC243772.1-201ENST00000451620 410 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.8□□□□□ -1.64
SRGAP3O43295 MTND5P22-201ENST00000458380 195 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 FTH1P2-201ENST00000466086 412 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 RPL23AP11-201ENST00000475260 469 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 RN7SL132P-201ENST00000478131 296 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 RPL39P5-202ENST00000512505 151 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.8□□□□□ -1.64
SRGAP3O43295 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.8□□□□□ -1.64
SRGAP3O43295 APOOP3-201ENST00000536787 586 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.8□□□□□ -1.64
SRGAP3O43295 CYCSP30-201ENST00000546447 172 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.8□□□□□ -1.64
SRGAP3O43295 AL118558.2-201ENST00000556294 238 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 MIR4703-201ENST00000577728 79 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 MIR4775-201ENST00000581168 75 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
SRGAP3O43295 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.8□□□□□ -1.64
SRGAP3O43295 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.8□□□□□ -1.64
SRGAP3O43295 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.8□□□□□ -1.64
SRGAP3O43295 AC092807.2-201ENST00000609367 243 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.8□□□□□ -1.64
SRGAP3O43295 uc_338.34-201ENST00000617467 174 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.8□□□□□ -1.64
SRGAP3O43295 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SRGAP3O43295 AC092079.1-201ENST00000558620 1985 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 LINC02471-203ENST00000641941 4752 ntBASIC4.8□□□□□ -1.64
SRGAP3O43295 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SRGAP3O43295 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SRGAP3O43295 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRGAP3O43295 MTND4P14-201ENST00000435799 1354 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SRGAP3O43295 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRGAP3O43295 Y_RNA.339-201ENST00000365325 102 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 RNU1-64P-201ENST00000365443 163 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 RNU6-278P-201ENST00000390945 109 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 RNU2-29P-201ENST00000410423 189 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.79□□□□□ -1.64
SRGAP3O43295 ARL5AP1-201ENST00000418991 388 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 AC087650.1-201ENST00000431445 468 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SRGAP3O43295 AL118520.1-201ENST00000450770 291 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.79□□□□□ -1.64
SRGAP3O43295 SNRPFP3-201ENST00000457792 225 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 AL162395.1-201ENST00000457882 422 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 RNU7-152P-201ENST00000458982 64 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 snoU13.7-201ENST00000459220 104 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 RNU7-66P-201ENST00000459469 62 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 RPL30P11-201ENST00000495304 339 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 AC146944.2-203ENST00000502493 354 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 AC139495.1-202ENST00000513164 354 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 snoU109.6-201ENST00000516831 118 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 RNU6-798P-201ENST00000516912 103 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.79□□□□□ -1.64
SRGAP3O43295 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.79□□□□□ -1.64
SRGAP3O43295 AC022695.1-201ENST00000522089 237 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 AC090281.1-201ENST00000523019 276 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.79□□□□□ -1.64
SRGAP3O43295 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.79□□□□□ -1.64
SRGAP3O43295 SNRPGP18-201ENST00000553000 214 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.79□□□□□ -1.64
SRGAP3O43295 NF1P5-201ENST00000588287 448 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 AC006006.1-201ENST00000603082 144 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.79□□□□□ -1.64
SRGAP3O43295 AC091925.1-201ENST00000623204 462 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.79□□□□□ -1.64
SRGAP3O43295 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.79□□□□□ -1.64
SRGAP3O43295 U6.114-201ENST00000636407 96 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 IPO8P1-201ENST00000455509 3109 ntBASIC4.79□□□□□ -1.64
SRGAP3O43295 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRGAP3O43295 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRGAP3O43295 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.79□□□□□ -1.64
SRGAP3O43295 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRGAP3O43295 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.79□□□□□ -1.64
SRGAP3O43295 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRGAP3O43295 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRGAP3O43295 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SRGAP3O43295 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.78□□□□□ -1.64
SRGAP3O43295 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SRGAP3O43295 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.78□□□□□ -1.64
SRGAP3O43295 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SRGAP3O43295 Y_RNA.197-201ENST00000364004 102 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 RNU6-1243P-201ENST00000364028 107 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 Y_RNA.378-201ENST00000365652 113 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SRGAP3O43295 Y_RNA.395-201ENST00000383945 109 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 RNU6-1105P-201ENST00000384774 107 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SRGAP3O43295 MIR548K-201ENST00000408406 116 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 SNORA3.3-201ENST00000408712 125 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 Y_RNA.605-201ENST00000410577 105 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 RPL37P10-201ENST00000412884 288 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 AC068533.1-201ENST00000418542 415 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms