Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AL049714.1-201ENST00000466686 347 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 RN7SL542P-201ENST00000467147 294 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 KCTD9P5-201ENST00000504141 1170 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 CDC42P4-201ENST00000510507 563 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 AC100870.1-201ENST00000522035 505 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 ARL2BPP2-201ENST00000550907 489 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 AC037471.2-201ENST00000564941 598 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 SDR42E1P2-201ENST00000614861 481 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC53A6NM62 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC53A6NM62 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 RNU6-511P-201ENST00000363496 107 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC53A6NM62 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 RPS29P4-201ENST00000414733 161 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 ELOCP4-201ENST00000420090 333 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 RPL27AP8-201ENST00000424277 446 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 RPL7L1P10-201ENST00000427790 463 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 RPL31P35-201ENST00000431058 377 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC091286.1-201ENST00000431233 461 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 USP12PX-201ENST00000432383 1057 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 SETP5-201ENST00000437270 562 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 MTND2P24-201ENST00000453434 806 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 Y_RNA.655-201ENST00000515919 96 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 RNU6-405P-201ENST00000516637 110 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 RNU6-1220P-201ENST00000517126 108 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC245166.1-201ENST00000521012 253 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC093331.1-201ENST00000521474 169 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 AL355836.1-201ENST00000555951 870 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 AP005205.1-201ENST00000563503 508 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.47□□□□□ -1.85
LRRC53A6NM62 MIR3167-201ENST00000579623 85 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC109347.2-201ENST00000610220 349 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC104073.3-201ENST00000610942 955 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 Z99129.1-201ENST00000612510 255 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 HULC.1-201ENST00000612720 240 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC091834.1-201ENST00000614543 472 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC090132.2-201ENST00000615881 347 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 AC138915.3-201ENST00000562908 1389 ntBASIC3.47□□□□□ -1.85
LRRC53A6NM62 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC53A6NM62 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
LRRC53A6NM62 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.46□□□□□ -1.85
LRRC53A6NM62 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LRRC53A6NM62 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LRRC53A6NM62 MIR490-201ENST00000384865 128 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 AL445189.1-201ENST00000405722 338 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 RNU2-36P-201ENST00000410361 191 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 RN7SKP140-201ENST00000411196 284 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 ARPC3P1-201ENST00000437218 533 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 RPS20P20-201ENST00000460498 340 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 MTCO2P29-201ENST00000465212 189 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 RPS23P3-201ENST00000470993 430 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 RN7SKP298-201ENST00000515950 94 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 RNU1-61P-201ENST00000516107 151 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 RNU6-430P-201ENST00000517078 107 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 NRON-201ENST00000517270 370 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 AC022616.3-201ENST00000523940 148 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 AC093012.1-202ENST00000549403 582 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 AC128657.1-201ENST00000549459 145 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 RPL21P12-201ENST00000559810 515 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.46□□□□□ -1.86
LRRC53A6NM62 AC004223.2-201ENST00000590309 544 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 BNIP3P33-201ENST00000598912 569 ntBASIC3.46□□□□□ -1.86
LRRC53A6NM62 AC079089.3-201ENST00000603094 673 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms