Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AL035410.1-201ENST00000427409 427 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AL645568.3-201ENST00000433683 316 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 SNRPGP6-201ENST00000451124 220 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 snoU109.4-201ENST00000458953 143 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AC104164.3-201ENST00000467363 1258 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 AL590396.2-201ENST00000636511 1041 ntBASIC1.92□□□□□ -2.1
SCN10AQ9Y5Y9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 RNU6-921P-201ENST00000384361 107 ntBASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 RNU7-95P-201ENST00000459222 64 ntBASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 RNU5A-7P-201ENST00000515979 116 ntBASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 ZNF705CP-201ENST00000530515 889 ntBASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 AC095057.3-201ENST00000567102 1157 ntBASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 MIR502-201ENST00000606349 86 ntBASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 AP000553.5-201ENST00000641933 54 ntBASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 TPTE2P4-201ENST00000258589 1605 ntBASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 AC093536.2-201ENST00000565257 1406 ntBASIC1.91□□□□□ -2.1
SCN10AQ9Y5Y9 RNU6-1072P-201ENST00000384703 107 ntBASIC1.9□□□□□ -2.1
SCN10AQ9Y5Y9 RNU6-443P-201ENST00000384780 107 ntBASIC1.9□□□□□ -2.1
SCN10AQ9Y5Y9 AL590623.1-201ENST00000427864 105 ntBASIC1.9□□□□□ -2.1
SCN10AQ9Y5Y9 HMGB1P31-201ENST00000437242 427 ntBASIC1.9□□□□□ -2.1
SCN10AQ9Y5Y9 SSXP1-201ENST00000453640 473 ntBASIC1.9□□□□□ -2.1
SCN10AQ9Y5Y9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.9□□□□□ -2.1
SCN10AQ9Y5Y9 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.9□□□□□ -2.1
SCN10AQ9Y5Y9 AC024560.3-201ENST00000608482 349 ntBASIC1.9□□□□□ -2.1
SCN10AQ9Y5Y9 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
SCN10AQ9Y5Y9 OR1S1-201ENST00000624470 978 ntBASIC1.9□□□□□ -2.1
SCN10AQ9Y5Y9 CR848007.1-201ENST00000442354 1699 ntBASIC1.9□□□□□ -2.1
SCN10AQ9Y5Y9 RNU6-543P-201ENST00000362576 108 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 SNORA51.11-201ENST00000384442 131 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 RNU6-441P-201ENST00000384545 106 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 AC092047.1-201ENST00000424997 240 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 AL353729.1-201ENST00000425044 720 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 BTF3P12-201ENST00000519620 469 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 AP000790.1-201ENST00000528891 737 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 TRAV28-201ENST00000557548 323 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 AC104581.2-201ENST00000572227 430 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 MIR8081-201ENST00000611533 95 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 AC140725.3-201ENST00000616193 880 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 AC009318.4-201ENST00000620496 486 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 AC010872.1-201ENST00000624225 675 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 AC098679.5-201ENST00000624394 571 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 OR5H6-203ENST00000642105 978 ntBASIC1.9□□□□□ -2.11
SCN10AQ9Y5Y9 MTCO1P18-201ENST00000455518 1419 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 ARL2BPP3-201ENST00000421226 480 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 COX6CP12-201ENST00000446748 202 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AC135721.1-201ENST00000497954 479 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AC005840.1-201ENST00000498412 377 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 OR4P1P-201ENST00000530808 1136 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 CR383656.7-201ENST00000548164 174 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 FAM60BP-201ENST00000578364 658 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AL589994.2-201ENST00000621124 579 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 MIR203B-201ENST00000636080 86 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AC016716.1-201ENST00000265882 708 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 DEFB108F-201ENST00000344638 222 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 SNORA68.1-201ENST00000364537 132 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 MIR649-201ENST00000384843 97 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 RPS7P9-201ENST00000414704 586 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AL358075.3-201ENST00000426289 226 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 ARPC3P1-201ENST00000437218 533 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms