Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC073901.1-201ENST00000462471 408 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 MTND2P14-201ENST00000482139 351 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 AC021382.1-201ENST00000483523 359 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 AC093809.1-201ENST00000509155 340 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 AC109464.2-201ENST00000510242 943 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 HSPE1P20-201ENST00000538133 289 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 AP005205.1-201ENST00000563503 508 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 AL354943.1-201ENST00000572103 781 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 LARP7P3-201ENST00000579888 337 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 AC234772.3-201ENST00000602277 528 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 AC013244.3-201ENST00000605614 388 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 RNU6-88P-201ENST00000606801 100 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 AC024560.3-201ENST00000608482 349 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 TUSC7.1-201ENST00000610969 165 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 AL450472.3-201ENST00000615578 367 ntBASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
TRAPPC4Q9Y296 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 OR5J1P-201ENST00000313544 939 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 RNU6-97P-201ENST00000363387 104 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 SNORD56.5-201ENST00000364281 72 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 RNU1-112P-201ENST00000364401 164 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 RNU1-109P-201ENST00000383960 147 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 RNA5SP252-201ENST00000391131 119 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 RN7SKP266-201ENST00000410232 287 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 RNA5SP492-201ENST00000411330 114 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 HMGN2P30-201ENST00000423237 256 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AC090774.1-201ENST00000435925 246 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 RSU1P2-202ENST00000437884 485 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 SRIP1-201ENST00000489235 288 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 DSTNP2-201ENST00000504533 515 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AC009901.1-201ENST00000506703 541 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 SNORA31.22-201ENST00000517204 135 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AP001804.3-201ENST00000525146 880 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AC007954.1-201ENST00000554198 494 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AC105224.1-201ENST00000587055 421 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AP001429.1-201ENST00000602568 530 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AC022022.2-201ENST00000602989 360 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AL049779.4-201ENST00000604500 156 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 AC002064.3-201ENST00000623448 346 ntBASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.43□□□□□ -2.02
TRAPPC4Q9Y296 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 AL391994.1-201ENST00000254724 282 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 DEFB108F-201ENST00000344638 222 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 AL672167.1-206ENST00000356293 943 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 RNU6-433P-201ENST00000363216 104 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 RNA5SP139-201ENST00000364340 117 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 RNU6-76P-201ENST00000384060 104 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 SNORA1.3-201ENST00000384676 136 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 AL360182.1-201ENST00000397433 468 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 AL356421.1-201ENST00000403255 413 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 PPP1R11P2-201ENST00000423543 382 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 RPL27AP8-201ENST00000424277 446 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 AL035407.1-201ENST00000429211 571 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 AL117351.1-201ENST00000438864 766 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 THAP5P1-201ENST00000439089 262 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 PAXBP1P1-201ENST00000449315 447 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 MTND1P9-201ENST00000453775 944 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 AC234775.1-201ENST00000454247 670 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 AL359385.1-201ENST00000456509 365 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 AP000852.1-201ENST00000472460 573 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 VN1R104P-201ENST00000505115 1009 ntBASIC2.42□□□□□ -2.02
TRAPPC4Q9Y296 HSPE1P23-201ENST00000509838 286 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms