Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
NOD1Q9Y239 AL121603.1-201ENST00000553815 142 ntBASIC5.5□□□□□ -1.53
NOD1Q9Y239 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.5□□□□□ -1.53
NOD1Q9Y239 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.5□□□□□ -1.53
NOD1Q9Y239 AC006363.1-201ENST00000603806 463 ntBASIC5.5□□□□□ -1.53
NOD1Q9Y239 AC123912.5-201ENST00000605470 343 ntBASIC5.5□□□□□ -1.53
NOD1Q9Y239 MIR1244-1-201ENST00000612829 85 ntBASIC5.5□□□□□ -1.53
NOD1Q9Y239 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.5□□□□□ -1.53
NOD1Q9Y239 MIR1244-3-201ENST00000635744 85 ntBASIC5.5□□□□□ -1.53
NOD1Q9Y239 MIR1244-2-201ENST00000636449 85 ntBASIC5.5□□□□□ -1.53
NOD1Q9Y239 MIR1244-4-202ENST00000636813 85 ntBASIC5.5□□□□□ -1.53
NOD1Q9Y239 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NOD1Q9Y239 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
NOD1Q9Y239 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NOD1Q9Y239 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NOD1Q9Y239 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.49□□□□□ -1.53
NOD1Q9Y239 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.49□□□□□ -1.53
NOD1Q9Y239 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
NOD1Q9Y239 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NOD1Q9Y239 RNA5SP52-201ENST00000362448 134 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 RNU4-44P-201ENST00000363050 141 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 RNU6-806P-201ENST00000365147 105 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 RNU6-356P-201ENST00000384140 107 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 AC009238.2-201ENST00000431026 355 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 AC138761.5-201ENST00000433967 325 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.49□□□□□ -1.53
NOD1Q9Y239 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.49□□□□□ -1.53
NOD1Q9Y239 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.49□□□□□ -1.53
NOD1Q9Y239 AURKAPS2-201ENST00000454983 333 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 AC010326.1-201ENST00000462726 602 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 RN7SL197P-201ENST00000466981 299 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 HMGN2P13-201ENST00000476476 274 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 RNU1-86P-201ENST00000516108 154 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 RNU1-107P-201ENST00000516617 154 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 RNU6-143P-201ENST00000516942 93 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NOD1Q9Y239 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.49□□□□□ -1.53
NOD1Q9Y239 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.49□□□□□ -1.53
NOD1Q9Y239 AC009962.1-201ENST00000567327 3813 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 AC009852.2-201ENST00000567898 485 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NOD1Q9Y239 AL121917.1-203ENST00000605534 577 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.49□□□□□ -1.53
NOD1Q9Y239 MIR6839-201ENST00000620425 113 ntBASIC5.49□□□□□ -1.53
NOD1Q9Y239 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NOD1Q9Y239 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NOD1Q9Y239 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.49□□□□□ -1.53
NOD1Q9Y239 AC009812.4-201ENST00000569134 1805 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NOD1Q9Y239 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NOD1Q9Y239 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
NOD1Q9Y239 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NOD1Q9Y239 RNU6-770P-201ENST00000363929 105 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 RNU4-50P-201ENST00000364361 141 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 SNORA20.1-201ENST00000364790 130 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 RNU6-1074P-201ENST00000383995 104 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 Y_RNA.477-201ENST00000384352 108 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 AL513331.1-201ENST00000411908 397 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.48□□□□□ -1.53
NOD1Q9Y239 BX510359.2-201ENST00000417920 305 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.48□□□□□ -1.53
NOD1Q9Y239 RPL7AP49-201ENST00000429522 581 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 AL591438.1-201ENST00000433508 581 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.48□□□□□ -1.53
NOD1Q9Y239 RPS29P9-201ENST00000440360 171 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 AL591623.2-201ENST00000449978 222 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.48□□□□□ -1.53
NOD1Q9Y239 AC022493.1-201ENST00000492984 337 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 MTND1P19-201ENST00000511780 315 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 RNU6-1023P-201ENST00000516137 106 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 RNU6-397P-201ENST00000516226 104 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 RNU6-1315P-201ENST00000517187 99 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.48□□□□□ -1.53
NOD1Q9Y239 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.48□□□□□ -1.53
NOD1Q9Y239 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.48□□□□□ -1.53
NOD1Q9Y239 AC007375.1-201ENST00000554513 578 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 AC090517.1-201ENST00000569307 266 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 AC004584.2-201ENST00000570407 410 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 MIR5096-201ENST00000583713 70 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.48□□□□□ -1.53
NOD1Q9Y239 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.48□□□□□ -1.53
NOD1Q9Y239 AC096772.1-201ENST00000609146 564 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 AC006023.2-201ENST00000609916 167 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 MIR6133-201ENST00000617057 108 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.48□□□□□ -1.53
NOD1Q9Y239 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NOD1Q9Y239 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.48□□□□□ -1.53
NOD1Q9Y239 MFSD8-216ENST00000641147 4009 ntBASIC5.48□□□□□ -1.53
NOD1Q9Y239 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
NOD1Q9Y239 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NOD1Q9Y239 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NOD1Q9Y239 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
NOD1Q9Y239 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NOD1Q9Y239 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NOD1Q9Y239 MAPK10-304ENST00000641341 3984 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
NOD1Q9Y239 Y_RNA.19-201ENST00000362462 99 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 RNU6-512P-201ENST00000364438 103 ntBASIC5.47□□□□□ -1.53
NOD1Q9Y239 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
NOD1Q9Y239 Y_RNA.515-201ENST00000384535 112 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms