Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 SNORA71.3-201ENST00000362582 128 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 Y_RNA.86-201ENST00000363020 111 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 RNY3P13-201ENST00000365542 102 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 MIR7-3-201ENST00000384898 110 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 MIR449B-201ENST00000384995 97 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 MIR607-201ENST00000385241 96 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AL354719.1-201ENST00000406535 843 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 RPL23AP30-201ENST00000432419 501 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 RPS3AP12-201ENST00000443616 753 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 FTH1P25-201ENST00000447665 469 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 RPS11P1-201ENST00000451072 473 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 HSPD1P15-201ENST00000505573 1122 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 HMGB3P15-201ENST00000507326 574 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AC010486.1-201ENST00000511793 424 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AC005798.1-201ENST00000513715 387 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 RNU6-27P-201ENST00000516146 107 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 SNORD27.1-201ENST00000516319 72 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 SNORD60.2-201ENST00000516883 86 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 IGKV2D-36-201ENST00000518643 226 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 OR4R3P-201ENST00000525084 838 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 GLYCAM1-201ENST00000546596 285 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AC018638.8-201ENST00000588755 281 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 GLUD1P4-201ENST00000590914 418 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AC004908.2-201ENST00000609090 574 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AC103710.2-201ENST00000609912 942 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AC099778.2-201ENST00000610904 211 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AC009233.1-201ENST00000616477 371 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 MIR6875-201ENST00000617506 72 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AL136221.1-201ENST00000621449 509 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AC010338.1-201ENST00000621823 717 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 MIR6500-201ENST00000622700 86 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 AP003400.5-201ENST00000624827 617 ntBASIC4.03□□□□□ -1.76
DKK3Q9UBP4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
DKK3Q9UBP4 FAM91A3P-201ENST00000456826 2544 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 MTCO1P24-201ENST00000515438 1558 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 U3.11-201ENST00000364476 212 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 Y_RNA.381-201ENST00000365666 102 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 MIR1-2-201ENST00000384961 85 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 MIR1251-201ENST00000408552 70 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 EI24P1-201ENST00000416584 867 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 RPS20P5-201ENST00000434808 360 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 AF228730.2-201ENST00000438784 848 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 BNIP3P2-201ENST00000441221 577 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 AC093019.1-201ENST00000443135 252 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 U3.44-201ENST00000458938 192 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 AL049714.1-201ENST00000466686 347 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 RPS4XP13-201ENST00000483219 789 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 VN1R105P-201ENST00000486595 910 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 AC020893.1-201ENST00000502452 580 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 TMEM248P1-201ENST00000510579 951 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 NARSP2-201ENST00000518524 679 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 AC123904.3-201ENST00000547218 814 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 YPEL5P3-201ENST00000547227 352 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 AL606490.9-201ENST00000603331 271 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 AC007038.2-201ENST00000608095 740 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 U73479.1-201ENST00000618062 168 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 AC112204.3-201ENST00000623822 332 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 PRO1804-201ENST00000623780 2050 ntBASIC4.02□□□□□ -1.77
DKK3Q9UBP4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
DKK3Q9UBP4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.01□□□□□ -1.77
DKK3Q9UBP4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms