Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AC103988.1-201ENST00000566382 2177 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AL445523.1-201ENST00000451184 1362 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 Y_RNA.46-201ENST00000362695 102 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 SNORA23-201ENST00000365128 182 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 SAR1AP2-201ENST00000392696 594 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 UBA52P6-201ENST00000399822 382 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AL031121.1-201ENST00000406553 254 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 MTND2P18-201ENST00000419962 1030 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 Z99497.1-201ENST00000421282 135 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 RPL27AP8-201ENST00000424277 446 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 MTATP6P17-201ENST00000431030 672 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 GAPDHP27-201ENST00000447427 1020 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AC012181.1-201ENST00000479895 423 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 RN7SL633P-201ENST00000488974 297 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AL359273.1-201ENST00000510918 627 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AC107016.2-201ENST00000547968 190 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AC109446.2-201ENST00000567872 497 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 ROCK1P1-201ENST00000573767 549 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 MIR3915-201ENST00000578518 97 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AC093732.2-201ENST00000607950 274 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AC009570.1-201ENST00000609599 745 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AF246928.1-201ENST00000623768 87 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 PABPC1P9-201ENST00000426076 1612 ntBASIC3.16□□□□□ -1.9
SNX25Q9H3E2 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX25Q9H3E2 SNORA46-201ENST00000384762 135 ntBASIC3.16□□□□□ -1.9
SNX25Q9H3E2 AC018630.2-202ENST00000422992 927 ntBASIC3.16□□□□□ -1.9
SNX25Q9H3E2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX25Q9H3E2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX25Q9H3E2 AL049734.2-201ENST00000441066 616 ntBASIC3.16□□□□□ -1.9
SNX25Q9H3E2 AL162389.1-201ENST00000449233 177 ntBASIC3.16□□□□□ -1.9
SNX25Q9H3E2 UQCRHP3-201ENST00000451503 251 ntBASIC3.16□□□□□ -1.9
SNX25Q9H3E2 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX25Q9H3E2 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SNX25Q9H3E2 DSTNP2-201ENST00000504533 515 ntBASIC3.16□□□□□ -1.9
SNX25Q9H3E2 AC116347.2-201ENST00000514912 523 ntBASIC3.16□□□□□ -1.9
SNX25Q9H3E2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX25Q9H3E2 AP001804.3-201ENST00000525146 880 ntBASIC3.16□□□□□ -1.9
SNX25Q9H3E2 OR5G4P-201ENST00000525251 760 ntBASIC3.16□□□□□ -1.9
SNX25Q9H3E2 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SNX25Q9H3E2 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX25Q9H3E2 AL133153.1-201ENST00000557756 303 ntBASIC3.16□□□□□ -1.9
SNX25Q9H3E2 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
SNX25Q9H3E2 AC005951.2-201ENST00000576282 495 ntBASIC3.16□□□□□ -1.9
SNX25Q9H3E2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.16□□□□□ -1.9
SNX25Q9H3E2 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SNX25Q9H3E2 TUG1_2.1-201ENST00000614234 87 ntBASIC3.16□□□□□ -1.9
SNX25Q9H3E2 AC104010.1-201ENST00000616889 150 ntBASIC3.16□□□□□ -1.9
SNX25Q9H3E2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SNX25Q9H3E2 DDX10P1-201ENST00000448545 1933 ntBASIC3.15□□□□□ -1.9
SNX25Q9H3E2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SNX25Q9H3E2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SNX25Q9H3E2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 RNU5A-1-201ENST00000362698 116 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 RNY4P24-201ENST00000362735 96 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 RNU5F-6P-201ENST00000362979 116 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 RNU1-39P-201ENST00000383897 165 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 RNU6-432P-201ENST00000384196 109 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 SNORA44-201ENST00000384584 132 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 MIR514A1-201ENST00000385133 98 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 RPS20P2-201ENST00000402520 389 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 EEF1A1P41-201ENST00000414667 207 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AC093151.1-201ENST00000427711 313 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 RPL35AP22-201ENST00000436855 335 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 KATNBL1P6-201ENST00000453433 915 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AC109486.1-201ENST00000486833 374 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 RPS15AP36-201ENST00000492022 382 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AC083906.5-201ENST00000503722 328 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 RPF2P2-201ENST00000504693 896 ntBASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.15□□□□□ -1.91
SNX25Q9H3E2 AC106038.2-201ENST00000520706 568 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms