Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC025750.2-201ENST00000442609 450 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 PAXBP1P1-201ENST00000449315 447 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 RPL21P134-201ENST00000453468 483 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 ATG12P2-201ENST00000456830 416 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AC090525.1-201ENST00000479116 478 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 SUMO2P6-201ENST00000505273 288 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AC116353.3-201ENST00000511215 249 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AC109445.1-201ENST00000512356 383 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 SUB1P1-201ENST00000524415 382 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AP003497.1-201ENST00000528472 562 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AC087465.1-201ENST00000560574 245 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 TPMTP1-201ENST00000592307 737 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 AC006270.3-201ENST00000605967 1036 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 CR381653.2-201ENST00000624041 768 ntBASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
POLR1EQ9GZS1 CCT4P2-201ENST00000233836 1548 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 OR5J1P-201ENST00000313544 939 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 RNU6-432P-201ENST00000384196 109 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 Y_RNA.465-201ENST00000384293 102 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AL360182.1-201ENST00000397433 468 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AL356057.2-201ENST00000403318 432 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 TXNP7-201ENST00000406296 293 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 RN7SKP140-201ENST00000411196 284 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 MTCO2P8-201ENST00000412213 658 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AC098614.2-201ENST00000426040 255 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AC091390.3-201ENST00000426478 338 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 GTF2IP20-201ENST00000431663 360 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AC114786.4-201ENST00000508771 728 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AC114797.1-201ENST00000514003 728 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 COX6CP5-201ENST00000527162 228 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 GTF3AP2-201ENST00000557014 266 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AL391261.3-201ENST00000557194 520 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AL139344.1-201ENST00000605228 195 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 ATP1B3P1-201ENST00000605365 821 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AC010133.1-201ENST00000615809 842 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AC006386.1-201ENST00000619436 415 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AC109809.1-201ENST00000619665 545 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 AC092447.10-201ENST00000620607 1652 ntBASIC2.73□□□□□ -1.97
POLR1EQ9GZS1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 SNORA80A-201ENST00000363922 136 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 RNU6-289P-201ENST00000364093 107 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 RNU6-744P-201ENST00000365557 107 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 RNU6-1316P-201ENST00000384242 108 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 RNU6-140P-201ENST00000384566 108 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 AL109755.1-201ENST00000401791 649 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 NDUFB4P4-201ENST00000404822 243 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 RNU2-33P-201ENST00000410344 192 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 MTND1P21-201ENST00000412991 285 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 AC013410.2-201ENST00000422627 201 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 ZYG11AP1-201ENST00000430329 837 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 RPL35AP22-201ENST00000436855 335 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 MTCO2P20-201ENST00000437339 673 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 GSTA11P-201ENST00000452866 669 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 RPS20P22-201ENST00000473700 357 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 AC108729.1-201ENST00000487812 947 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 AC113155.1-201ENST00000511141 769 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 ATP5F1P5-201ENST00000526403 760 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 GLYCAM1-201ENST00000546596 285 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 AC025281.1-201ENST00000567026 265 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 MIR4635-201ENST00000583759 79 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 HMGN2P15-201ENST00000585707 270 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 OR1M4P-201ENST00000589199 287 ntBASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.72□□□□□ -1.97
POLR1EQ9GZS1 AL357094.1-201ENST00000603845 844 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms