Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 C8orf59P2-201ENST00000603441 271 ntBASIC2.8□□□□□ -1.96
VGLL1Q99990 Z84480.1-201ENST00000605131 311 ntBASIC2.8□□□□□ -1.96
VGLL1Q99990 AL121992.2-201ENST00000606262 256 ntBASIC2.8□□□□□ -1.96
VGLL1Q99990 AC104260.1-201ENST00000616660 539 ntBASIC2.8□□□□□ -1.96
VGLL1Q99990 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VGLL1Q99990 MIR6500-201ENST00000622700 86 ntBASIC2.8□□□□□ -1.96
VGLL1Q99990 AC112484.5-201ENST00000624189 228 ntBASIC2.8□□□□□ -1.96
VGLL1Q99990 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.8□□□□□ -1.96
VGLL1Q99990 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.8□□□□□ -1.96
VGLL1Q99990 SNORA50A-202ENST00000629536 136 ntBASIC2.8□□□□□ -1.96
VGLL1Q99990 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
VGLL1Q99990 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VGLL1Q99990 CKAP2P1-201ENST00000555477 2049 ntBASIC2.8□□□□□ -1.96
VGLL1Q99990 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
VGLL1Q99990 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.79□□□□□ -1.96
VGLL1Q99990 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VGLL1Q99990 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VGLL1Q99990 AL645937.1-201ENST00000641739 1652 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VGLL1Q99990 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VGLL1Q99990 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VGLL1Q99990 RPL7P26-201ENST00000333817 754 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VGLL1Q99990 RPL32P3-201ENST00000359025 275 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 SNORD56.2-201ENST00000363242 71 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 RNU5E-8P-201ENST00000363502 116 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 RNU6-694P-201ENST00000364071 147 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 U3.11-201ENST00000364476 212 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 RNU6-1078P-201ENST00000364522 103 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 Y_RNA.367-201ENST00000365544 101 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 MIR558-201ENST00000384920 94 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 MIR141-201ENST00000384975 95 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 SNORA57.3-201ENST00000411095 141 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.79□□□□□ -1.96
VGLL1Q99990 OR9R1P-201ENST00000412200 877 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 MTCO3P12-201ENST00000416718 547 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.79□□□□□ -1.96
VGLL1Q99990 ZNF863P-201ENST00000426746 417 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC137499.1-201ENST00000427602 88 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 RPS27AP12-201ENST00000429552 465 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC005094.1-201ENST00000440420 368 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC079781.2-201ENST00000446424 169 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC016696.1-201ENST00000446949 318 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AC009220.1-201ENST00000451614 275 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AL356010.1-201ENST00000456364 102 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC108059.3-201ENST00000456388 214 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 RNU7-59P-201ENST00000459101 61 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AP000852.1-201ENST00000472460 573 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 RPL21P103-201ENST00000479921 488 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AC233702.1-201ENST00000482905 502 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 RPS3AP50-201ENST00000487064 803 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC135721.1-201ENST00000497954 479 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 HMGN1P12-201ENST00000499125 195 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC008628.2-201ENST00000502605 298 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AC018710.1-201ENST00000506509 158 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 RNA5SP164-201ENST00000516533 110 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 RNU6-410P-201ENST00000517006 107 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 MIR2116-201ENST00000517221 80 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.79□□□□□ -1.96
VGLL1Q99990 OR5B19P-201ENST00000531766 928 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.79□□□□□ -1.96
VGLL1Q99990 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.79□□□□□ -1.96
VGLL1Q99990 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
VGLL1Q99990 ARL2BPP2-201ENST00000550907 489 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 TRAV37-201ENST00000553906 342 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AC037471.2-201ENST00000564941 598 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AL117336.2-201ENST00000602435 335 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AL591034.3-201ENST00000605511 685 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC008945.2-201ENST00000606056 604 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC004908.2-201ENST00000609090 574 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AC006504.8-201ENST00000621046 635 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AC024940.5-201ENST00000622889 474 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AL136313.1-201ENST00000624804 202 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AC005183.1-201ENST00000603687 1979 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 AC006020.1-201ENST00000420179 1854 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
VGLL1Q99990 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VGLL1Q99990 AL353746.1-201ENST00000566293 6881 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.79□□□□□ -1.96
VGLL1Q99990 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
VGLL1Q99990 AP001148.1-201ENST00000624124 2359 ntBASIC2.79□□□□□ -1.96
VGLL1Q99990 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VGLL1Q99990 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VGLL1Q99990 SRP72P2-201ENST00000344851 1979 ntBASIC2.78□□□□□ -1.96
VGLL1Q99990 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms