Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC116096.1-201ENST00000566804 2314 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SYNGAP1Q96PV0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
SYNGAP1Q96PV0 MAPK10-320ENST00000641462 6696 ntBASIC5.15□□□□□ -1.58
SYNGAP1Q96PV0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SYNGAP1Q96PV0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.15□□□□□ -1.58
SYNGAP1Q96PV0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.15□□□□□ -1.58
SYNGAP1Q96PV0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SYNGAP1Q96PV0 EXOC5P1-201ENST00000510543 1969 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 RNU6-960P-201ENST00000364056 120 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 Y_RNA.404-201ENST00000383978 102 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 NDUFB4P4-201ENST00000404822 243 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 RPL21P24-201ENST00000413752 448 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 AC080125.1-201ENST00000414888 684 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 AC234775.1-201ENST00000454247 670 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 RN7SL132P-201ENST00000478131 296 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 AF213884.1-201ENST00000488102 463 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 AC026801.2-201ENST00000515352 425 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 RNU6-470P-201ENST00000515954 104 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 Y_RNA.670-201ENST00000516255 105 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 MRPL49P2-201ENST00000521066 465 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 RNU6-323P-201ENST00000521915 107 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 DEFB108D-201ENST00000527787 222 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 RPL23AP84-201ENST00000571193 464 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 MIR4293-201ENST00000584305 78 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 AC006272.2-201ENST00000594725 163 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 IPO5P1-202ENST00000600039 287 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 AC123786.2-201ENST00000603459 275 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 ARF4P1-201ENST00000605447 541 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 AL023881.1-201ENST00000621088 301 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 AC243312.2-201ENST00000623340 601 ntBASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SYNGAP1Q96PV0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 Y_RNA.2-201ENST00000362330 96 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 RNA5SP366-201ENST00000365454 123 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 Y_RNA.428-201ENST00000384078 102 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 MIR449B-201ENST00000384995 97 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 RPS26P8-201ENST00000393490 348 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 Y_RNA.594-201ENST00000410373 140 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 AC093151.1-201ENST00000427711 313 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 SUMO1P2-201ENST00000452524 304 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 AC092451.1-201ENST00000480211 153 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 RN7SL432P-201ENST00000484057 298 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 AC016065.2-201ENST00000514530 444 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 SNORD116.3-201ENST00000517176 78 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 AC110743.1-201ENST00000584870 478 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 MIR5692C1-201ENST00000585309 91 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 U2.1-201ENST00000618978 145 ntBASIC5.14□□□□□ -1.59
SYNGAP1Q96PV0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 AL158163.1-201ENST00000603915 1649 ntBASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 RNU6-450P-201ENST00000364654 107 ntBASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 RNU6-637P-201ENST00000384050 107 ntBASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 RNU6-306P-201ENST00000384617 107 ntBASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 SNORA75.6-201ENST00000391318 127 ntBASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 RNU6-101P-201ENST00000410323 104 ntBASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 RPL23AP26-201ENST00000412728 464 ntBASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 AC008267.5-201ENST00000424928 265 ntBASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 OR4C10P-201ENST00000434991 931 ntBASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 HSFY6P-201ENST00000445573 403 ntBASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 HMGB3P30-201ENST00000457863 606 ntBASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 UQCRHP4-201ENST00000471686 272 ntBASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.13□□□□□ -1.59
SYNGAP1Q96PV0 RNU1-45P-201ENST00000517191 141 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms