Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.09□□□□□ -2.23
CFAP54Q96N23 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
CFAP54Q96N23 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CFAP54Q96N23 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
CFAP54Q96N23 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.09□□□□□ -2.24
CFAP54Q96N23 BX322635.1-201ENST00000605804 496 ntBASIC1.09□□□□□ -2.24
CFAP54Q96N23 MFSD8-213ENST00000641134 1327 ntBASIC1.09□□□□□ -2.24
CFAP54Q96N23 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.08□□□□□ -2.24
CFAP54Q96N23 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CFAP54Q96N23 Y_RNA.136-201ENST00000363444 102 ntBASIC1.08□□□□□ -2.24
CFAP54Q96N23 RNA5SP465-201ENST00000391195 109 ntBASIC1.08□□□□□ -2.24
CFAP54Q96N23 AL121601.2-201ENST00000438019 707 ntBASIC1.08□□□□□ -2.24
CFAP54Q96N23 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.08□□□□□ -2.24
CFAP54Q96N23 AC092754.2-201ENST00000463506 460 ntBASIC1.08□□□□□ -2.24
CFAP54Q96N23 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.08□□□□□ -2.24
CFAP54Q96N23 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.08□□□□□ -2.24
CFAP54Q96N23 AC004941.2-201ENST00000427009 228 ntBASIC1.08□□□□□ -2.24
CFAP54Q96N23 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.08□□□□□ -2.24
CFAP54Q96N23 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.08□□□□□ -2.24
CFAP54Q96N23 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.08□□□□□ -2.24
CFAP54Q96N23 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.08□□□□□ -2.24
CFAP54Q96N23 AC024619.4-201ENST00000580924 316 ntBASIC1.08□□□□□ -2.24
CFAP54Q96N23 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CFAP54Q96N23 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
CFAP54Q96N23 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CFAP54Q96N23 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CFAP54Q96N23 AC007098.1-201ENST00000420122 367 ntBASIC1.07□□□□□ -2.24
CFAP54Q96N23 AP004607.1-201ENST00000524456 203 ntBASIC1.07□□□□□ -2.24
CFAP54Q96N23 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.07□□□□□ -2.24
CFAP54Q96N23 ICE2P2-201ENST00000483823 2787 ntBASIC1.07□□□□□ -2.24
CFAP54Q96N23 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.07□□□□□ -2.24
CFAP54Q96N23 RPL21P39-201ENST00000463605 483 ntBASIC1.07□□□□□ -2.24
CFAP54Q96N23 RPS15AP34-201ENST00000487776 387 ntBASIC1.07□□□□□ -2.24
CFAP54Q96N23 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
CFAP54Q96N23 AC004808.1-201ENST00000627671 721 ntBASIC1.07□□□□□ -2.24
CFAP54Q96N23 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.07□□□□□ -2.24
CFAP54Q96N23 SSXP10-201ENST00000402595 565 ntBASIC1.07□□□□□ -2.24
CFAP54Q96N23 AL360221.1-201ENST00000445989 335 ntBASIC1.07□□□□□ -2.24
CFAP54Q96N23 AC113155.1-201ENST00000511141 769 ntBASIC1.07□□□□□ -2.24
CFAP54Q96N23 SNORA31.16-201ENST00000516773 139 ntBASIC1.07□□□□□ -2.24
CFAP54Q96N23 MIR4711-201ENST00000578274 70 ntBASIC1.07□□□□□ -2.24
CFAP54Q96N23 MIR4714-201ENST00000580728 77 ntBASIC1.07□□□□□ -2.24
CFAP54Q96N23 AC009452.1-201ENST00000640823 606 ntBASIC1.07□□□□□ -2.24
CFAP54Q96N23 AC233728.2-201ENST00000425348 757 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 AC244035.1-201ENST00000430042 390 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 AC104806.1-201ENST00000508720 308 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 AC093281.2-201ENST00000510153 597 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 RNA5SP364-201ENST00000516938 78 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 SETP2-201ENST00000553886 926 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 AC005034.5-201ENST00000604219 466 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 AC087588.2-201ENST00000617667 426 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 AC090617.7-201ENST00000623952 126 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.06□□□□□ -2.24
CFAP54Q96N23 XIST-201ENST00000416330 750 ntTSL 2 BASIC1.06□□□□□ -2.24
CFAP54Q96N23 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.06□□□□□ -2.24
CFAP54Q96N23 PSPHP1-201ENST00000450062 261 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 MTND4LP22-201ENST00000508209 276 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 AC087808.1-201ENST00000520501 361 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 AP004247.1-201ENST00000531556 1289 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 MIR4723-201ENST00000585070 81 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 AL158032.1-201ENST00000605401 106 ntBASIC1.06□□□□□ -2.24
CFAP54Q96N23 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CFAP54Q96N23 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CFAP54Q96N23 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.05□□□□□ -2.24
CFAP54Q96N23 MIR591-201ENST00000385290 95 ntBASIC1.05□□□□□ -2.24
CFAP54Q96N23 RNU11-5P-201ENST00000391216 129 ntBASIC1.05□□□□□ -2.24
CFAP54Q96N23 MIR936-201ENST00000401264 98 ntBASIC1.05□□□□□ -2.24
CFAP54Q96N23 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.05□□□□□ -2.24
CFAP54Q96N23 AP003497.1-201ENST00000528472 562 ntBASIC1.05□□□□□ -2.24
CFAP54Q96N23 ANP32BP3-201ENST00000559213 706 ntBASIC1.05□□□□□ -2.24
CFAP54Q96N23 AC126177.8-201ENST00000618339 1015 ntBASIC1.05□□□□□ -2.24
CFAP54Q96N23 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.05□□□□□ -2.24
CFAP54Q96N23 XIST_intron.1-201ENST00000619444 68 ntBASIC1.05□□□□□ -2.24
CFAP54Q96N23 RNU6-666P-201ENST00000363499 107 ntBASIC1.05□□□□□ -2.24
CFAP54Q96N23 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.05□□□□□ -2.24
CFAP54Q96N23 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
CFAP54Q96N23 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.04□□□□□ -2.24
CFAP54Q96N23 AC099336.2-201ENST00000422457 254 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 RNA5SP233-201ENST00000459153 113 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.04□□□□□ -2.24
CFAP54Q96N23 ZNF192P1-203ENST00000565888 810 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 TXNP7-201ENST00000406296 293 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 AC019070.1-201ENST00000415008 1024 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.04□□□□□ -2.24
CFAP54Q96N23 ARL5AP2-201ENST00000444698 533 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.04□□□□□ -2.24
CFAP54Q96N23 AP000254.1-201ENST00000609934 520 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 AC108706.1-201ENST00000611053 297 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 AC097655.1-201ENST00000635075 318 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.04□□□□□ -2.24
CFAP54Q96N23 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CFAP54Q96N23 RNA5SP295-201ENST00000362655 121 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 OR1L1-202ENST00000373686 1083 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 Y_RNA.549-201ENST00000384657 102 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 SEM1P1-201ENST00000506694 209 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 PABPC1P7-201ENST00000413177 1513 ntBASIC1.04□□□□□ -2.24
CFAP54Q96N23 ZNF37BP-203ENST00000452306 1352 ntBASIC1.03□□□□□ -2.24
CFAP54Q96N23 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.03□□□□□ -2.24
CFAP54Q96N23 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms