Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU6-203P-201ENST00000384038 104 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 Z86062.1-201ENST00000406773 777 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 PSMA2P3-201ENST00000429685 675 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 AC109583.1-201ENST00000432156 268 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 RPL30P12-201ENST00000474666 353 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 GAS5-AS1-201ENST00000602767 694 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
VPS13CQ709C8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
VPS13CQ709C8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC0.83□□□□□ -2.28
VPS13CQ709C8 Y_RNA.167-201ENST00000363735 109 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.83□□□□□ -2.28
VPS13CQ709C8 RPS27P1-201ENST00000450552 247 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 RPL31P58-201ENST00000469001 379 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS13CQ709C8 AC233266.2-201ENST00000567067 528 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 MIR4723-201ENST00000585070 81 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 RNU6-666P-201ENST00000363499 107 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 JTBP1-201ENST00000441314 247 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS13CQ709C8 SNORA31.23-201ENST00000517219 133 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 AC007115.1-201ENST00000546853 234 ntBASIC0.83□□□□□ -2.28
VPS13CQ709C8 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS13CQ709C8 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS13CQ709C8 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS13CQ709C8 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.82□□□□□ -2.28
VPS13CQ709C8 AC008962.1-201ENST00000605729 304 ntBASIC0.82□□□□□ -2.28
VPS13CQ709C8 Y_RNA.518-201ENST00000384552 113 ntBASIC0.82□□□□□ -2.28
VPS13CQ709C8 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
VPS13CQ709C8 RPL7P53-201ENST00000421245 739 ntBASIC0.82□□□□□ -2.28
VPS13CQ709C8 SUMO1P4-201ENST00000429430 302 ntBASIC0.82□□□□□ -2.28
VPS13CQ709C8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS13CQ709C8 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS13CQ709C8 SNX5P1-201ENST00000505757 1041 ntBASIC0.82□□□□□ -2.28
VPS13CQ709C8 RNA5SP309-201ENST00000516670 106 ntBASIC0.82□□□□□ -2.28
VPS13CQ709C8 AC009127.3-201ENST00000570531 403 ntBASIC0.82□□□□□ -2.28
VPS13CQ709C8 AC068620.4-201ENST00000636730 1182 ntBASIC0.82□□□□□ -2.28
VPS13CQ709C8 AL118496.1-201ENST00000440201 1812 ntBASIC0.82□□□□□ -2.28
VPS13CQ709C8 RNA5SP393-201ENST00000363423 117 ntBASIC0.82□□□□□ -2.28
VPS13CQ709C8 AC019070.1-201ENST00000415008 1024 ntBASIC0.82□□□□□ -2.28
VPS13CQ709C8 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS13CQ709C8 USP9YP35-201ENST00000435696 412 ntBASIC0.82□□□□□ -2.28
VPS13CQ709C8 SNRPGP3-201ENST00000469405 227 ntBASIC0.82□□□□□ -2.28
VPS13CQ709C8 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC0.82□□□□□ -2.28
VPS13CQ709C8 AL512504.1-201ENST00000415494 778 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 AL512661.1-201ENST00000434586 1253 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 RPS15AP7-201ENST00000439294 405 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 AC012170.1-201ENST00000495139 359 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.81□□□□□ -2.28
VPS13CQ709C8 SNORA48.9-201ENST00000516419 162 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 VTA1P2-201ENST00000520205 911 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS13CQ709C8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
VPS13CQ709C8 RNU4-52P-201ENST00000384209 138 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 RNA5SP233-201ENST00000459153 113 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 AC023424.2-201ENST00000493479 777 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC0.81□□□□□ -2.28
VPS13CQ709C8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.81□□□□□ -2.28
VPS13CQ709C8 AC104229.1-201ENST00000561364 255 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 MIR4714-201ENST00000580728 77 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 MIR330-201ENST00000362196 94 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS13CQ709C8 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS13CQ709C8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC0.81□□□□□ -2.28
VPS13CQ709C8 ANP32BP3-201ENST00000559213 706 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 MIR8087-201ENST00000612745 78 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 AC007742.2-201ENST00000618226 398 ntBASIC0.81□□□□□ -2.28
VPS13CQ709C8 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
VPS13CQ709C8 SNRPEP3-201ENST00000338402 276 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 RNU2-37P-201ENST00000410695 177 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 RNU6-603P-201ENST00000411403 107 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 CST2P1-201ENST00000425770 87 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 AL360221.1-201ENST00000445989 335 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 AP003497.1-201ENST00000528472 562 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 AP002967.1-201ENST00000624203 539 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 AC103710.2-202ENST00000641454 2853 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 AC130650.2-201ENST00000618736 2403 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 AC008669.1-201ENST00000565823 2178 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 ZNF37BP-203ENST00000452306 1352 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 RPL27AP8-201ENST00000424277 446 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 AC015922.2-201ENST00000435593 184 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 ARL5AP2-201ENST00000444698 533 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS13CQ709C8 RPL26P9-201ENST00000457466 433 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 AL161722.3-201ENST00000605789 2983 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 AC109780.2-201ENST00000413467 845 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC0.8□□□□□ -2.28
VPS13CQ709C8 AL591212.2-201ENST00000433923 257 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 XKRYP6-201ENST00000440468 1116 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 XKRYP3-201ENST00000442113 1116 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS13CQ709C8 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS13CQ709C8 AC008676.3-201ENST00000521237 435 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 OR6C7P-201ENST00000547875 934 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.8□□□□□ -2.28
VPS13CQ709C8 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
VPS13CQ709C8 Y_RNA.549-201ENST00000384657 102 ntBASIC0.79□□□□□ -2.28
VPS13CQ709C8 ZNF965P-201ENST00000432501 817 ntBASIC0.79□□□□□ -2.28
VPS13CQ709C8 AC004854.1-201ENST00000440356 349 ntBASIC0.79□□□□□ -2.28
VPS13CQ709C8 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS13CQ709C8 AC090617.7-201ENST00000623952 126 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms