Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 SNORA68.2-201ENST00000391263 128 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 AL391417.1-201ENST00000404100 426 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 AC108032.1-201ENST00000416706 207 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 RPL23AP69-201ENST00000431134 458 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 AL445584.1-201ENST00000431451 330 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 SNRPEP4-201ENST00000435815 279 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 HMGB3P21-201ENST00000452483 547 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 AC008526.1-201ENST00000509149 338 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 RNA5SP73-201ENST00000516744 108 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 AC107918.3-201ENST00000533272 382 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 AC010201.1-201ENST00000605051 540 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 AC012409.4-201ENST00000612923 249 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 Z95331.1-201ENST00000623075 23112 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AL031595.2-201ENST00000624215 19071 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 RNU6-989P-201ENST00000362756 107 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 RNA5SP387-201ENST00000364226 106 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 RNU6-196P-201ENST00000384315 107 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 RNU6-328P-201ENST00000390887 106 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 RNA5SP219-201ENST00000390940 113 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 MIR450B-201ENST00000401182 78 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 BX682237.1-201ENST00000415016 335 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AL137014.1-201ENST00000420490 1226 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 PDSS1P1-201ENST00000422953 1114 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 GOT2P5-201ENST00000433995 546 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AC026801.2-201ENST00000515352 425 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 HIGD1AP3-201ENST00000515857 278 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AC093012.1-202ENST00000549403 582 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AC090115.3-201ENST00000553218 849 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 DNAJC8P1-201ENST00000554535 372 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 MTCO3P23-201ENST00000561363 289 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AL669831.4-202ENST00000590817 238 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AL160290.3-201ENST00000604869 165 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 AC010378.1-201ENST00000619270 362 ntBASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USPL1Q5W0Q7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 RNU1-20P-201ENST00000363314 162 ntBASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 SMIM11P1-201ENST00000369586 178 ntBASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 Y_RNA.493-201ENST00000384422 102 ntBASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 AL391219.1-201ENST00000422570 483 ntBASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 RPL31P12-201ENST00000422587 358 ntBASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 AL591704.1-201ENST00000432574 275 ntBASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 RNU7-167P-201ENST00000459160 62 ntBASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 RPL23AP65-201ENST00000475608 468 ntBASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 AL135752.1-201ENST00000479477 471 ntBASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 RANP9-201ENST00000519957 271 ntBASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 AC090151.1-201ENST00000520784 730 ntBASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 IFITM8P-201ENST00000522529 394 ntBASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 AC023442.1-201ENST00000531247 422 ntBASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 RPL21P7-201ENST00000557463 483 ntBASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.4□□□□□ -1.54
USPL1Q5W0Q7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms