Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC008127.2-201ENST00000549925 1075 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.64□□□□□ -1.99
CKAP4Q07065 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.64□□□□□ -1.99
CKAP4Q07065 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.64□□□□□ -1.99
CKAP4Q07065 NBR2-204ENST00000587322 63 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 RPL23AP78-201ENST00000599928 470 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 AC004987.4-201ENST00000603383 338 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 AC128687.1-201ENST00000605304 619 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.64□□□□□ -1.99
CKAP4Q07065 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.64□□□□□ -1.99
CKAP4Q07065 AC091931.1-201ENST00000623488 728 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 AC231657.1-201ENST00000624313 397 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 AC007494.3-201ENST00000624660 743 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 CR381572.1-201ENST00000625098 102 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.64□□□□□ -1.99
CKAP4Q07065 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.64□□□□□ -1.99
CKAP4Q07065 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CKAP4Q07065 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 RNA5SP374-201ENST00000362939 125 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 Y_RNA.77-201ENST00000362962 107 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 RNA5SP456-201ENST00000364002 114 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 RNA5SP88-201ENST00000365560 109 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CKAP4Q07065 SNORA41-201ENST00000384675 132 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AC016769.3-201ENST00000396562 315 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AL356057.3-201ENST00000402607 340 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AL024474.1-201ENST00000404655 591 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.63□□□□□ -1.99
CKAP4Q07065 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.63□□□□□ -1.99
CKAP4Q07065 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 MORF4L1P6-201ENST00000418771 268 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.63□□□□□ -1.99
CKAP4Q07065 HMGN2P30-201ENST00000423237 256 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.63□□□□□ -1.99
CKAP4Q07065 AC244035.1-201ENST00000430042 390 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 ZYG11AP1-201ENST00000430329 837 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.63□□□□□ -1.99
CKAP4Q07065 EEF1E1P1-201ENST00000446998 430 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.63□□□□□ -1.99
CKAP4Q07065 MTND1P29-201ENST00000448112 647 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 OR6C5P-201ENST00000452388 923 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 USP9YP34-201ENST00000453983 808 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AC073901.1-201ENST00000462471 408 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.63□□□□□ -1.99
CKAP4Q07065 AC072039.1-201ENST00000477611 581 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AC109486.1-201ENST00000486833 374 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 HIGD1AP13-201ENST00000509878 289 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 MTCO3P44-201ENST00000510977 541 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 MTCO3P28-201ENST00000513351 515 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AC117532.1-201ENST00000514638 323 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 RNA5SP216-201ENST00000516111 123 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 HSPA8P13-201ENST00000523715 472 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AC243972.3-201ENST00000539655 198 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.63□□□□□ -1.99
CKAP4Q07065 AC128657.1-201ENST00000549459 145 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 PRELID2P1-201ENST00000552837 301 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.63□□□□□ -1.99
CKAP4Q07065 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.63□□□□□ -1.99
CKAP4Q07065 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.63□□□□□ -1.99
CKAP4Q07065 AL590229.1-201ENST00000603497 542 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 RNU6-88P-201ENST00000606801 100 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 OR2AS2P-201ENST00000606902 342 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AC135507.1-201ENST00000607214 561 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AC106028.5-201ENST00000610332 395 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 AL355810.1-201ENST00000614629 552 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 MIR7844-201ENST00000616161 122 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CKAP4Q07065 MIR6076-201ENST00000617521 113 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 Z69908.1-201ENST00000622603 247 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 U6.101-201ENST00000637707 76 ntBASIC2.63□□□□□ -1.99
CKAP4Q07065 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.62□□□□□ -1.99
CKAP4Q07065 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CKAP4Q07065 RNA5SP72-201ENST00000364442 117 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CKAP4Q07065 RNU1-109P-201ENST00000383960 147 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 U3.37-201ENST00000408528 213 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 AL592148.1-201ENST00000413568 445 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 NPM1P11-201ENST00000417106 855 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.62□□□□□ -1.99
CKAP4Q07065 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.62□□□□□ -1.99
CKAP4Q07065 BX119904.4-201ENST00000424402 301 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.62□□□□□ -1.99
CKAP4Q07065 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.62□□□□□ -1.99
CKAP4Q07065 AL513328.1-201ENST00000446460 224 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 ARPC3P5-201ENST00000448802 534 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 PABPC1P3-201ENST00000469174 459 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.62□□□□□ -1.99
CKAP4Q07065 TMEM251P1-201ENST00000503717 318 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.62□□□□□ -1.99
CKAP4Q07065 AC026427.2-201ENST00000506228 536 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.62□□□□□ -1.99
CKAP4Q07065 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.62□□□□□ -1.99
CKAP4Q07065 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.62□□□□□ -1.99
CKAP4Q07065 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.62□□□□□ -1.99
CKAP4Q07065 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.62□□□□□ -1.99
CKAP4Q07065 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.62□□□□□ -1.99
CKAP4Q07065 AF131215.7-201ENST00000602443 707 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 NUTF2P8-201ENST00000604593 363 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms