Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HDAC4P56524 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HDAC4P56524 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HDAC4P56524 MIR19A-201ENST00000384878 82 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 Y_RNA.582-201ENST00000391023 95 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 RPS3AP36-201ENST00000398190 775 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 RNU6-516P-201ENST00000411381 104 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.64□□□□□ -1.83
HDAC4P56524 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.64□□□□□ -1.83
HDAC4P56524 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 SPA17P1-201ENST00000416656 452 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 AC068533.1-201ENST00000418542 415 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 YPEL5P1-201ENST00000419731 367 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.64□□□□□ -1.83
HDAC4P56524 RPL35AP22-201ENST00000436855 335 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.64□□□□□ -1.83
HDAC4P56524 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HDAC4P56524 PCBP2P3-201ENST00000509726 843 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 AC091133.4-201ENST00000511142 308 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.64□□□□□ -1.83
HDAC4P56524 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
HDAC4P56524 RN7SKP298-201ENST00000515950 94 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 RNU6-430P-201ENST00000517078 107 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HDAC4P56524 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.64□□□□□ -1.83
HDAC4P56524 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.64□□□□□ -1.83
HDAC4P56524 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.64□□□□□ -1.83
HDAC4P56524 COX6CP3-201ENST00000580869 223 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.64□□□□□ -1.83
HDAC4P56524 AC067852.3-201ENST00000589177 561 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 AC121334.2-201ENST00000605387 271 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 RNU6-87P-201ENST00000607561 108 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 AC004908.2-201ENST00000609090 574 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.64□□□□□ -1.83
HDAC4P56524 BX664608.1-201ENST00000610519 487 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 AL357559.1-201ENST00000622228 274 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 AL159972.1-201ENST00000625150 448 ntBASIC3.64□□□□□ -1.83
HDAC4P56524 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.64□□□□□ -1.83
HDAC4P56524 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.64□□□□□ -1.83
HDAC4P56524 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HDAC4P56524 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HDAC4P56524 MTND5P26-201ENST00000426018 1752 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HDAC4P56524 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HDAC4P56524 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
HDAC4P56524 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HDAC4P56524 MFSD8-233ENST00000641482 4860 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 GNG5P1-201ENST00000255500 204 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HDAC4P56524 RNY4P34-201ENST00000364779 95 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HDAC4P56524 RNU6-259P-201ENST00000383999 107 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 RPS3AP24-201ENST00000407896 734 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 Z92545.1-201ENST00000411782 234 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HDAC4P56524 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.63□□□□□ -1.83
HDAC4P56524 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.63□□□□□ -1.83
HDAC4P56524 USP9YP36-201ENST00000424581 829 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 DPPA2P1-201ENST00000428060 556 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.63□□□□□ -1.83
HDAC4P56524 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.63□□□□□ -1.83
HDAC4P56524 MTND1P34-201ENST00000438556 671 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.63□□□□□ -1.83
HDAC4P56524 RBMY2UP-201ENST00000453474 324 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.63□□□□□ -1.83
HDAC4P56524 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.63□□□□□ -1.83
HDAC4P56524 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.63□□□□□ -1.83
HDAC4P56524 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.63□□□□□ -1.83
HDAC4P56524 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.63□□□□□ -1.83
HDAC4P56524 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.63□□□□□ -1.83
HDAC4P56524 HMGN1P28-201ENST00000521340 364 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 AP001804.3-201ENST00000525146 880 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.63□□□□□ -1.83
HDAC4P56524 AC103843.2-201ENST00000530523 682 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 AL133271.1-201ENST00000538229 291 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.63□□□□□ -1.83
HDAC4P56524 TRAV37-201ENST00000553906 342 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.63□□□□□ -1.83
HDAC4P56524 AC137800.2-201ENST00000574375 120 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 MIR3922-201ENST00000585192 84 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.63□□□□□ -1.83
HDAC4P56524 AC012443.1-201ENST00000605605 231 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 AC109347.2-201ENST00000610220 349 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 AC068792.1-201ENST00000621354 417 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 AL138713.1-201ENST00000624026 2130 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 PISRT1-201ENST00000626175 531 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HDAC4P56524 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HDAC4P56524 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HDAC4P56524 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.63□□□□□ -1.83
HDAC4P56524 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.63□□□□□ -1.83
HDAC4P56524 AC110774.1-201ENST00000623567 2018 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 AC002546.1-201ENST00000588041 2504 ntBASIC3.63□□□□□ -1.83
HDAC4P56524 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.62□□□□□ -1.83
HDAC4P56524 FARSBP1-201ENST00000435808 1778 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HDAC4P56524 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HDAC4P56524 RNU5A-8P-201ENST00000364102 114 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 RN7SKP226-201ENST00000364912 300 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms