Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.18□□□□□ -1.9
PDX1P52945 UBE2FP1-201ENST00000416536 447 ntBASIC3.18□□□□□ -1.9
PDX1P52945 SPA17P1-201ENST00000416656 452 ntBASIC3.18□□□□□ -1.9
PDX1P52945 YPEL5P1-201ENST00000419731 367 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.18□□□□□ -1.9
PDX1P52945 AL589872.1-201ENST00000426602 288 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.18□□□□□ -1.9
PDX1P52945 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.18□□□□□ -1.9
PDX1P52945 ATP5C1P1-201ENST00000441945 895 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AL121871.1-201ENST00000443413 436 ntBASIC3.18□□□□□ -1.9
PDX1P52945 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.18□□□□□ -1.9
PDX1P52945 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.18□□□□□ -1.9
PDX1P52945 RPL23AP14-201ENST00000468281 468 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AC109925.1-201ENST00000478069 331 ntBASIC3.18□□□□□ -1.9
PDX1P52945 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.18□□□□□ -1.9
PDX1P52945 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.18□□□□□ -1.9
PDX1P52945 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.18□□□□□ -1.9
PDX1P52945 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.18□□□□□ -1.9
PDX1P52945 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PDX1P52945 ERHP1-201ENST00000523006 310 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.18□□□□□ -1.9
PDX1P52945 AC011602.1-201ENST00000546484 331 ntBASIC3.18□□□□□ -1.9
PDX1P52945 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.18□□□□□ -1.9
PDX1P52945 AC004024.1-201ENST00000549244 247 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AC024909.2-201ENST00000553035 286 ntBASIC3.18□□□□□ -1.9
PDX1P52945 MIR5047-201ENST00000579212 100 ntBASIC3.18□□□□□ -1.9
PDX1P52945 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AL162713.1-201ENST00000604480 262 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AL033523.1-201ENST00000605153 153 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AC103591.3-201ENST00000608684 209 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.18□□□□□ -1.9
PDX1P52945 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AC091304.9-201ENST00000612091 226 ntBASIC3.18□□□□□ -1.9
PDX1P52945 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.18□□□□□ -1.9
PDX1P52945 TUG1_2.1-201ENST00000614234 87 ntBASIC3.18□□□□□ -1.9
PDX1P52945 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AC138932.5-201ENST00000617759 563 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AC092656.1-203ENST00000624134 423 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AC006386.2-201ENST00000624491 75 ntBASIC3.18□□□□□ -1.9
PDX1P52945 AC012005.1-201ENST00000624575 75 ntBASIC3.18□□□□□ -1.9
PDX1P52945 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PDX1P52945 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PDX1P52945 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.18□□□□□ -1.9
PDX1P52945 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PDX1P52945 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PDX1P52945 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.17□□□□□ -1.9
PDX1P52945 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.17□□□□□ -1.9
PDX1P52945 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDX1P52945 U8.3-201ENST00000363321 132 ntBASIC3.17□□□□□ -1.9
PDX1P52945 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.17□□□□□ -1.9
PDX1P52945 SNORA23-201ENST00000365128 182 ntBASIC3.17□□□□□ -1.9
PDX1P52945 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.17□□□□□ -1.9
PDX1P52945 RNU6-1119P-201ENST00000384349 108 ntBASIC3.17□□□□□ -1.9
PDX1P52945 RPS3AP36-201ENST00000398190 775 ntBASIC3.17□□□□□ -1.9
PDX1P52945 RN7SKP285-201ENST00000410137 318 ntBASIC3.17□□□□□ -1.9
PDX1P52945 RNU6-195P-201ENST00000411352 109 ntBASIC3.17□□□□□ -1.9
PDX1P52945 RNU2-71P-201ENST00000411395 189 ntBASIC3.17□□□□□ -1.9
PDX1P52945 CDK8P2-201ENST00000415020 547 ntBASIC3.17□□□□□ -1.9
PDX1P52945 MORF4L1P6-201ENST00000418771 268 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC019097.1-201ENST00000424783 735 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.17□□□□□ -1.9
PDX1P52945 RPL23AP82-202ENST00000427528 469 ntBASIC3.17□□□□□ -1.9
PDX1P52945 DLGAP5P1-201ENST00000430307 464 ntBASIC3.17□□□□□ -1.9
PDX1P52945 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.17□□□□□ -1.9
PDX1P52945 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.17□□□□□ -1.9
PDX1P52945 AL353705.1-201ENST00000433468 480 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.17□□□□□ -1.9
PDX1P52945 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.17□□□□□ -1.9
PDX1P52945 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.17□□□□□ -1.9
PDX1P52945 AC005094.1-201ENST00000440420 368 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AL662791.1-201ENST00000441992 928 ntBASIC3.17□□□□□ -1.9
PDX1P52945 MTCO2P7-201ENST00000446518 666 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AL033528.1-201ENST00000453780 140 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.17□□□□□ -1.9
PDX1P52945 RNU7-59P-201ENST00000459101 61 ntBASIC3.17□□□□□ -1.9
PDX1P52945 CENPBD1P1-201ENST00000464061 469 ntBASIC3.17□□□□□ -1.9
PDX1P52945 UBE2DNL-203ENST00000474922 222 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AL049830.2-201ENST00000480072 201 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC096576.1-201ENST00000489014 359 ntBASIC3.17□□□□□ -1.9
PDX1P52945 RPS15AP36-201ENST00000492022 382 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.17□□□□□ -1.9
PDX1P52945 RPL23AP94-201ENST00000512518 302 ntBASIC3.17□□□□□ -1.9
PDX1P52945 APOOP4-201ENST00000513530 597 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.17□□□□□ -1.9
PDX1P52945 SNORA31.8-201ENST00000516327 108 ntBASIC3.17□□□□□ -1.9
PDX1P52945 RNU2-46P-201ENST00000517038 113 ntBASIC3.17□□□□□ -1.9
PDX1P52945 RNU6-64P-201ENST00000517119 105 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC107934.2-201ENST00000518653 310 ntBASIC3.17□□□□□ -1.9
PDX1P52945 DEFB108A-201ENST00000530110 222 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AP002963.1-201ENST00000530590 184 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.17□□□□□ -1.9
PDX1P52945 AC135279.1-201ENST00000543493 504 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.17□□□□□ -1.9
PDX1P52945 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.17□□□□□ -1.9
PDX1P52945 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.17□□□□□ -1.9
PDX1P52945 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.17□□□□□ -1.9
PDX1P52945 MIR3913-1-201ENST00000577744 102 ntBASIC3.17□□□□□ -1.9
PDX1P52945 LARP7P3-201ENST00000579888 337 ntBASIC3.17□□□□□ -1.9
PDX1P52945 AC103987.3-201ENST00000582071 292 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms