Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A3P25940 AC135279.1-201ENST00000543493 504 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 ACTR3BP3-201ENST00000565577 979 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 AC068620.3-201ENST00000602749 560 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 DUXAP4-201ENST00000603046 613 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 AC112503.2-201ENST00000609005 552 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 MIR6864-201ENST00000617935 70 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 RNA5SP391-201ENST00000363456 119 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.94□□□□□ -2.1
COL5A3P25940 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.94□□□□□ -2.1
COL5A3P25940 BX664727.1-201ENST00000416024 466 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 AL031659.1-201ENST00000447075 539 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 DPPA3P1-201ENST00000448050 469 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 MTND2P39-201ENST00000457230 764 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 PPP1R2P5-201ENST00000457256 603 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.94□□□□□ -2.1
COL5A3P25940 MTCO2P9-201ENST00000503214 694 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
COL5A3P25940 MTCO2P32-201ENST00000514865 403 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.94□□□□□ -2.1
COL5A3P25940 AC095057.3-201ENST00000567102 1157 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 AC024614.2-201ENST00000577584 372 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 MIR4452-201ENST00000583004 71 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 AC009269.6-201ENST00000621778 588 ntBASIC1.94□□□□□ -2.1
COL5A3P25940 MFSD8-213ENST00000641134 1327 ntBASIC1.93□□□□□ -2.1
COL5A3P25940 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COL5A3P25940 SNORA63.3-201ENST00000362682 132 ntBASIC1.93□□□□□ -2.1
COL5A3P25940 U8.1-201ENST00000362843 134 ntBASIC1.93□□□□□ -2.1
COL5A3P25940 RPL23AP29-201ENST00000397284 453 ntBASIC1.93□□□□□ -2.1
COL5A3P25940 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.93□□□□□ -2.1
COL5A3P25940 DEFB130D-201ENST00000426866 237 ntBASIC1.93□□□□□ -2.1
COL5A3P25940 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.93□□□□□ -2.1
COL5A3P25940 RPS26P56-201ENST00000444468 240 ntBASIC1.93□□□□□ -2.1
COL5A3P25940 RPS4XP11-201ENST00000446897 772 ntBASIC1.93□□□□□ -2.1
COL5A3P25940 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COL5A3P25940 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.93□□□□□ -2.1
COL5A3P25940 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.93□□□□□ -2.1
COL5A3P25940 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.93□□□□□ -2.1
COL5A3P25940 AF279873.1-201ENST00000523393 313 ntBASIC1.93□□□□□ -2.1
COL5A3P25940 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.93□□□□□ -2.1
COL5A3P25940 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.93□□□□□ -2.1
COL5A3P25940 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.93□□□□□ -2.1
COL5A3P25940 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.93□□□□□ -2.1
COL5A3P25940 AL157834.3-201ENST00000615543 103 ntBASIC1.93□□□□□ -2.1
COL5A3P25940 AC025048.6-202ENST00000627667 438 ntBASIC1.93□□□□□ -2.1
COL5A3P25940 MIR517C-201ENST00000385103 95 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 ANAPC10P1-201ENST00000395991 556 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 FO393413.1-201ENST00000402892 195 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 MTATP6P31-201ENST00000406985 692 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.92□□□□□ -2.1
COL5A3P25940 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.92□□□□□ -2.1
COL5A3P25940 AL358075.3-201ENST00000426289 226 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.92□□□□□ -2.1
COL5A3P25940 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.92□□□□□ -2.1
COL5A3P25940 RPL7P55-201ENST00000450522 746 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL5A3P25940 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.92□□□□□ -2.1
COL5A3P25940 AC096992.1-201ENST00000459808 709 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 AC008379.1-201ENST00000463655 464 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 AC104689.1-201ENST00000473356 768 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL5A3P25940 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.92□□□□□ -2.1
COL5A3P25940 AC112206.4-201ENST00000515142 405 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 RNU6-711P-201ENST00000517255 106 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.92□□□□□ -2.1
COL5A3P25940 AC023825.1-201ENST00000566704 1030 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 MIR3935-201ENST00000583472 104 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 AC012254.4-201ENST00000588843 273 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.92□□□□□ -2.1
COL5A3P25940 AC005296.1-201ENST00000616145 209 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 AC068880.4-201ENST00000623082 495 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
COL5A3P25940 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.92□□□□□ -2.1
COL5A3P25940 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.92□□□□□ -2.1
COL5A3P25940 NUP58P1-201ENST00000502546 1738 ntBASIC1.92□□□□□ -2.1
COL5A3P25940 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.91□□□□□ -2.1
COL5A3P25940 Y_RNA.327-201ENST00000365201 102 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 AL355143.1-201ENST00000407101 841 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 RNU2-21P-201ENST00000410368 188 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 LINC01347-201ENST00000417964 355 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.91□□□□□ -2.1
COL5A3P25940 RPS29P20-201ENST00000489592 171 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 MTND3P3-201ENST00000505004 126 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.91□□□□□ -2.1
COL5A3P25940 MTCO3P27-201ENST00000514397 196 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 RNA5SP102-201ENST00000516865 106 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 SNORA31.24-201ENST00000517232 57 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 AP003717.3-201ENST00000544832 1180 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.91□□□□□ -2.1
COL5A3P25940 AC093510.2-201ENST00000562820 896 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 MIR3199-1-201ENST00000582434 88 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.91□□□□□ -2.1
COL5A3P25940 MIR6895-201ENST00000613497 78 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 MIR8084-201ENST00000614105 89 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 AC006213.4-201ENST00000616184 634 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.91□□□□□ -2.1
COL5A3P25940 AC097372.4-201ENST00000625025 466 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 AL590396.2-201ENST00000636511 1041 ntBASIC1.91□□□□□ -2.1
COL5A3P25940 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL5A3P25940 PABPC1P9-201ENST00000426076 1612 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms