Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL360221.1-201ENST00000445989 335 ntBASIC1.24□□□□□ -2.21
HMGA1P17096 PMCHL2-203ENST00000457791 237 ntBASIC1.24□□□□□ -2.21
HMGA1P17096 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGA1P17096 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGA1P17096 AC022634.1-201ENST00000520765 532 ntBASIC1.24□□□□□ -2.21
HMGA1P17096 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.24□□□□□ -2.21
HMGA1P17096 AC013553.2-201ENST00000604244 589 ntBASIC1.24□□□□□ -2.21
HMGA1P17096 AC002487.1-201ENST00000604565 994 ntBASIC1.24□□□□□ -2.21
HMGA1P17096 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGA1P17096 AL390862.1-201ENST00000635467 1469 ntBASIC1.24□□□□□ -2.21
HMGA1P17096 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.23□□□□□ -2.21
HMGA1P17096 RNU4-91P-201ENST00000364778 135 ntBASIC1.23□□□□□ -2.21
HMGA1P17096 DNAJC19P6-201ENST00000401853 280 ntBASIC1.23□□□□□ -2.21
HMGA1P17096 AC007560.1-201ENST00000426912 237 ntBASIC1.23□□□□□ -2.21
HMGA1P17096 AL356867.1-201ENST00000429623 299 ntBASIC1.23□□□□□ -2.21
HMGA1P17096 AP000949.1-201ENST00000438328 629 ntBASIC1.23□□□□□ -2.21
HMGA1P17096 RPS24P6-201ENST00000452670 400 ntBASIC1.23□□□□□ -2.21
HMGA1P17096 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGA1P17096 AC096745.1-201ENST00000509945 370 ntBASIC1.23□□□□□ -2.21
HMGA1P17096 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HMGA1P17096 NPM1P52-201ENST00000518264 846 ntBASIC1.23□□□□□ -2.21
HMGA1P17096 OR10V3P-201ENST00000525712 725 ntBASIC1.23□□□□□ -2.21
HMGA1P17096 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.23□□□□□ -2.21
HMGA1P17096 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGA1P17096 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
HMGA1P17096 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.23□□□□□ -2.21
HMGA1P17096 AL627230.6-201ENST00000611129 280 ntBASIC1.23□□□□□ -2.21
HMGA1P17096 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HMGA1P17096 AC025016.1-201ENST00000616746 682 ntBASIC1.23□□□□□ -2.21
HMGA1P17096 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.23□□□□□ -2.21
HMGA1P17096 AC006963.1-201ENST00000624003 1052 ntBASIC1.23□□□□□ -2.21
HMGA1P17096 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.23□□□□□ -2.21
HMGA1P17096 AC009812.4-201ENST00000569134 1805 ntBASIC1.23□□□□□ -2.21
HMGA1P17096 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HMGA1P17096 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.23□□□□□ -2.21
HMGA1P17096 OR4G11P-202ENST00000642116 1414 ntBASIC1.23□□□□□ -2.21
HMGA1P17096 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.22□□□□□ -2.21
HMGA1P17096 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
HMGA1P17096 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.22□□□□□ -2.21
HMGA1P17096 RNU1-62P-201ENST00000362599 164 ntBASIC1.22□□□□□ -2.21
HMGA1P17096 U8.3-201ENST00000363321 132 ntBASIC1.22□□□□□ -2.21
HMGA1P17096 RNU6-997P-201ENST00000384725 107 ntBASIC1.22□□□□□ -2.21
HMGA1P17096 AC009414.1-201ENST00000427200 443 ntBASIC1.22□□□□□ -2.21
HMGA1P17096 OR51AB1P-201ENST00000429046 620 ntBASIC1.22□□□□□ -2.21
HMGA1P17096 AC023347.2-201ENST00000433994 462 ntBASIC1.22□□□□□ -2.21
HMGA1P17096 AL121601.2-201ENST00000438019 707 ntBASIC1.22□□□□□ -2.21
HMGA1P17096 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGA1P17096 COX6CP14-201ENST00000469580 174 ntBASIC1.22□□□□□ -2.21
HMGA1P17096 RPS3AP22-201ENST00000488297 769 ntBASIC1.22□□□□□ -2.21
HMGA1P17096 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGA1P17096 AC118942.1-201ENST00000529674 1035 ntBASIC1.22□□□□□ -2.21
HMGA1P17096 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGA1P17096 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HMGA1P17096 AC022662.1-201ENST00000580252 331 ntBASIC1.22□□□□□ -2.21
HMGA1P17096 MIR3117-201ENST00000584034 78 ntBASIC1.22□□□□□ -2.21
HMGA1P17096 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGA1P17096 AC068880.5-201ENST00000624331 290 ntBASIC1.22□□□□□ -2.21
HMGA1P17096 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
HMGA1P17096 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
HMGA1P17096 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HMGA1P17096 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGA1P17096 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGA1P17096 MTND5P25-201ENST00000430499 799 ntBASIC1.21□□□□□ -2.22
HMGA1P17096 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HMGA1P17096 Z80107.1-201ENST00000436830 412 ntBASIC1.21□□□□□ -2.22
HMGA1P17096 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
HMGA1P17096 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.21□□□□□ -2.22
HMGA1P17096 MTND3P6-201ENST00000485242 339 ntBASIC1.21□□□□□ -2.22
HMGA1P17096 AC020699.1-201ENST00000505161 445 ntBASIC1.21□□□□□ -2.22
HMGA1P17096 MRPS17P9-201ENST00000511924 393 ntBASIC1.21□□□□□ -2.22
HMGA1P17096 RN7SKP277-201ENST00000516895 283 ntBASIC1.21□□□□□ -2.22
HMGA1P17096 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
HMGA1P17096 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGA1P17096 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGA1P17096 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGA1P17096 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.21□□□□□ -2.22
HMGA1P17096 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.21□□□□□ -2.22
HMGA1P17096 AC019131.2-201ENST00000609071 870 ntBASIC1.21□□□□□ -2.22
HMGA1P17096 AC004908.2-201ENST00000609090 574 ntBASIC1.21□□□□□ -2.22
HMGA1P17096 AP001486.3-201ENST00000615334 372 ntBASIC1.21□□□□□ -2.22
HMGA1P17096 AC010733.2-201ENST00000589496 5702 ntBASIC1.21□□□□□ -2.22
HMGA1P17096 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.21□□□□□ -2.22
HMGA1P17096 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HMGA1P17096 AC027514.1-201ENST00000588561 1603 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.2□□□□□ -2.22
HMGA1P17096 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.2□□□□□ -2.22
HMGA1P17096 ARL2BPP3-201ENST00000421226 480 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 PIGFP3-201ENST00000441918 722 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.2□□□□□ -2.22
HMGA1P17096 OR6K5P-201ENST00000447050 945 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 RPS29P23-201ENST00000458635 123 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.2□□□□□ -2.22
HMGA1P17096 CABYRP1-201ENST00000465493 1045 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 SETP11-201ENST00000473027 690 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 HMGB1P22-201ENST00000505315 124 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 ATP5EP1-201ENST00000510257 156 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 RNU7-193P-201ENST00000516723 65 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 RNA5SP490-201ENST00000517141 136 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 AC087272.1-201ENST00000523624 533 ntBASIC1.2□□□□□ -2.22
HMGA1P17096 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms