Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 ZNF658B-202ENST00000615961 3375 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 RNU6-492P-201ENST00000363035 104 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 RNU6-354P-201ENST00000383862 107 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 RNU6-610P-201ENST00000384264 107 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 SNORA48.3-201ENST00000391081 134 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 SNORA3.2-201ENST00000408221 125 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 MORF4L1P6-201ENST00000418771 268 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AC007742.1-201ENST00000425789 329 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AC007560.1-201ENST00000426912 237 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AL512844.2-201ENST00000433990 593 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 ELOCP26-201ENST00000436067 329 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 MTND4P15-201ENST00000437913 1033 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 THAP5P1-201ENST00000439089 262 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 ARF4P4-201ENST00000439608 520 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 BTBD7P2-201ENST00000441962 620 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 SEPT14P24-201ENST00000447236 180 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AL353691.1-201ENST00000451332 387 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AC092757.1-201ENST00000467293 467 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AC004263.1-201ENST00000479327 332 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 ANXA2P1-201ENST00000505539 926 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AC008549.1-201ENST00000512900 643 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AC023632.1-201ENST00000518463 375 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AC118942.1-201ENST00000529674 1035 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AC091544.4-201ENST00000555268 342 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 MIR1273D-201ENST00000577266 86 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 MIR5694-201ENST00000581190 76 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AC090330.1-201ENST00000588646 764 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AC013553.2-201ENST00000604244 589 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AL031176.1-201ENST00000604554 466 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 AL592148.2-201ENST00000612210 372 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 VN1R74P-201ENST00000613259 503 ntBASIC1.71□□□□□ -2.14
TRAV41A0A0B4J266 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AL049641.1-201ENST00000441055 1948 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 SUGT1P1-201ENST00000379514 476 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 MIR325-201ENST00000385260 98 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 TMSB4XP8-201ENST00000402089 135 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 TMSB4XP6-201ENST00000415187 135 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 DPH3P2-201ENST00000422618 250 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 TMSB4XP1-201ENST00000424567 135 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AL096829.2-201ENST00000446582 742 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AC005297.2-201ENST00000450430 606 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AC097493.1-201ENST00000463958 372 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 TRBV12-1-201ENST00000479785 344 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AC109486.1-201ENST00000486833 374 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AC022483.1-201ENST00000514020 567 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 SCARNA16.3-201ENST00000516595 184 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 SNORA31.22-201ENST00000517204 135 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 MTCYBP27-201ENST00000555160 670 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AC044913.1-201ENST00000557200 430 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AGGF1P5-201ENST00000567900 919 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AC122134.1-202ENST00000569111 1201 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 RPS3AP23-202ENST00000574601 686 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AC107294.1-201ENST00000609524 467 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 OR10AB1P-201ENST00000609613 938 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AC012640.5-201ENST00000623897 319 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AC093591.3-201ENST00000634516 308 ntBASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
TRAV41A0A0B4J266 AC010329.5-201ENST00000623497 2174 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AL596028.1-201ENST00000326971 197 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 Y_RNA.548-201ENST00000384656 105 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AL355497.1-201ENST00000406262 551 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 RN7SKP223-201ENST00000410582 62 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 RN7SKP192-201ENST00000411291 327 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 RPS7P9-201ENST00000414704 586 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AC005005.2-201ENST00000420779 380 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 MTCO2P1-201ENST00000424648 477 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 MTND2P5-201ENST00000432656 1006 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms