Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 Y_RNA.384-201ENST00000383909 102 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 SNORA36C-201ENST00000384289 132 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 POLHP1-201ENST00000411806 470 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AC080125.1-201ENST00000414888 684 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 RPL17P36-201ENST00000420302 549 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AC079780.1-201ENST00000428259 207 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AL591704.1-201ENST00000432574 275 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 HLA-N-201ENST00000437516 135 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 HMGB1P18-201ENST00000438801 619 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AC104058.1-201ENST00000448028 297 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 HMGB3P30-201ENST00000457863 606 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AC083904.1-201ENST00000487828 231 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AC110792.1-201ENST00000491826 472 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 SCOCP1-201ENST00000554676 349 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AC092747.3-201ENST00000603769 301 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 ARF4P1-201ENST00000605447 541 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AL360181.4-201ENST00000621752 134 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 LARP1BP1-201ENST00000506036 1359 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AC011266.1-201ENST00000624119 3569 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 AC006971.1-201ENST00000407916 4486 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 MIR331-201ENST00000362302 94 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 RNU4-79P-201ENST00000362764 141 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 SNORD113-7-201ENST00000363762 77 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 RNU1-132P-201ENST00000364300 164 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 RNA5SP515-201ENST00000364570 118 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 XGY1-201ENST00000381172 446 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 Y_RNA.431-201ENST00000384086 102 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 MIR3065-201ENST00000390137 79 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 snoU13.24-201ENST00000458998 104 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 AC105137.1-201ENST00000484355 562 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 RPS26P15-201ENST00000488067 348 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 HMGN1P13-201ENST00000505795 138 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 CCDC34P1-201ENST00000507441 517 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 IFITM8P-201ENST00000522529 394 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 TRAV8-5-201ENST00000537369 341 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 AC025884.1-201ENST00000556034 378 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 AL118558.2-201ENST00000556294 238 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 AC007224.1-201ENST00000564410 144 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 AL355375.2-201ENST00000574825 175 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 MIR3160-1-201ENST00000577972 85 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 MIR5583-1-201ENST00000580941 59 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 DPPA3P3-201ENST00000603842 430 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 AC113403.1-201ENST00000604910 193 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 AC009570.1-201ENST00000609599 745 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 U2.17-201ENST00000611454 95 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 uc_338.13-201ENST00000618243 179 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 MIR3653-201ENST00000625572 110 ntBASIC5.02□□□□□ -1.61
DDX41Q9UJV9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
DDX41Q9UJV9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 MFSD8-242ENST00000641690 4199 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DDX41Q9UJV9 RNU6-1127P-201ENST00000384580 107 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 EIF4E2P1-201ENST00000393781 255 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 CISD1P1-201ENST00000393907 327 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 FAT1P1-201ENST00000406588 507 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 HSPE1P8-201ENST00000406997 288 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 MIR1193-201ENST00000408109 78 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 SNORA11F-201ENST00000408237 128 ntBASIC5.01□□□□□ -1.61
DDX41Q9UJV9 RN7SKP263-201ENST00000411194 309 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms