Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.94□□□□□ -2.1
CISHQ9NSE2 AC023824.2-201ENST00000566185 400 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.94□□□□□ -2.1
CISHQ9NSE2 MIR3616-201ENST00000584070 92 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 NRBF2P1-201ENST00000587407 859 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 MIR1264-201ENST00000616374 69 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 AC026634.1-201ENST00000634369 198 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.94□□□□□ -2.1
CISHQ9NSE2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
CISHQ9NSE2 GDI2P1-201ENST00000429312 1336 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CISHQ9NSE2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.93□□□□□ -2.1
CISHQ9NSE2 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CISHQ9NSE2 DEFB108F-201ENST00000344638 222 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 RNU6-1005P-201ENST00000384519 107 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 RNU6-882P-201ENST00000391025 103 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.93□□□□□ -2.1
CISHQ9NSE2 MIR1289-2-201ENST00000408360 111 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.93□□□□□ -2.1
CISHQ9NSE2 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.93□□□□□ -2.1
CISHQ9NSE2 AL121890.1-201ENST00000435457 205 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CISHQ9NSE2 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.93□□□□□ -2.1
CISHQ9NSE2 FGF7P5-201ENST00000441829 291 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.93□□□□□ -2.1
CISHQ9NSE2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.93□□□□□ -2.1
CISHQ9NSE2 RNU7-23P-201ENST00000459465 62 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 RPL31P60-201ENST00000478450 367 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 RNU6-798P-201ENST00000516912 103 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 RNA5SP364-201ENST00000516938 78 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.93□□□□□ -2.1
CISHQ9NSE2 DEFB108D-201ENST00000527787 222 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.93□□□□□ -2.1
CISHQ9NSE2 OR11H5P-201ENST00000554039 926 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 AL049838.1-201ENST00000563647 981 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 AGGF1P5-201ENST00000567900 919 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.93□□□□□ -2.1
CISHQ9NSE2 AC097504.2-201ENST00000608088 454 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.93□□□□□ -2.1
CISHQ9NSE2 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.93□□□□□ -2.1
CISHQ9NSE2 AL163051.2-201ENST00000618976 735 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 HSPA8P4-201ENST00000511877 1920 ntBASIC1.93□□□□□ -2.1
CISHQ9NSE2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CISHQ9NSE2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CISHQ9NSE2 RNU6-619P-201ENST00000365146 108 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 MIR16-1-201ENST00000385271 89 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 MIR1294-201ENST00000408503 142 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.92□□□□□ -2.1
CISHQ9NSE2 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CISHQ9NSE2 MTCYBP45-201ENST00000435243 565 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 PGBD4P3-201ENST00000440731 581 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 AC114878.1-201ENST00000441166 358 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CISHQ9NSE2 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CISHQ9NSE2 RNU6-420P-201ENST00000458780 107 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 AC104164.3-201ENST00000467363 1258 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.92□□□□□ -2.1
CISHQ9NSE2 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CISHQ9NSE2 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CISHQ9NSE2 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CISHQ9NSE2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CISHQ9NSE2 AL359273.1-201ENST00000510918 627 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CISHQ9NSE2 RNU6-928P-201ENST00000516876 104 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 AC025755.1-201ENST00000521306 278 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.92□□□□□ -2.1
CISHQ9NSE2 AK6P1-201ENST00000540219 478 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 AC121758.2-201ENST00000553271 193 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 AC068135.2-201ENST00000569293 1028 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 AL020997.3-201ENST00000602843 359 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.92□□□□□ -2.1
CISHQ9NSE2 AC103710.4-201ENST00000609301 899 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 MIR6845-201ENST00000613182 61 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 VN1R9P-201ENST00000614184 867 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.92□□□□□ -2.1
CISHQ9NSE2 AL356585.4-201ENST00000623078 1229 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CISHQ9NSE2 AC012640.5-201ENST00000623897 319 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.92□□□□□ -2.1
CISHQ9NSE2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CISHQ9NSE2 SGO1P1-201ENST00000603525 1447 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CISHQ9NSE2 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
CISHQ9NSE2 KPNA2P1-201ENST00000458289 1591 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 SNORA3A-201ENST00000364113 130 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 RNU6-115P-201ENST00000364310 107 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.91□□□□□ -2.1
CISHQ9NSE2 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.91□□□□□ -2.1
CISHQ9NSE2 RPL7P54-201ENST00000438336 674 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 USP9YP15-201ENST00000442391 422 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.91□□□□□ -2.1
CISHQ9NSE2 Z82190.1-201ENST00000454534 490 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.91□□□□□ -2.1
CISHQ9NSE2 AC090453.1-201ENST00000495560 436 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 YWHAEP4-201ENST00000505390 198 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 SNORA31.18-201ENST00000517043 134 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms