Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 RNU6-420P-201ENST00000458780 107 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 RPL37P25-201ENST00000507308 276 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AC021146.8-201ENST00000507455 733 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 MRPS36P2-201ENST00000512569 299 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AP001429.1-201ENST00000602568 530 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 BBIP1P1-201ENST00000602999 279 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AL136363.1-201ENST00000605349 337 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AC011330.2-201ENST00000621680 635 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AC008443.7-201ENST00000622195 246 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AC099654.9-201ENST00000637055 678 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 CR848007.1-201ENST00000442354 1699 ntBASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.21□□□□□ -2.06
EXOSC4Q9NPD3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 ZNF29P-201ENST00000225587 168 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 SNORD62.1-201ENST00000362541 86 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 Y_RNA.234-201ENST00000364409 97 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 SNORA70.4-201ENST00000365509 134 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 RNU6-443P-201ENST00000384780 107 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 RNA5SP354-201ENST00000391247 136 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 MTATP6P20-201ENST00000414147 562 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 USP9YP11-201ENST00000427537 717 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 RPL7L1P10-201ENST00000427790 463 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 CYCSP32-201ENST00000440548 321 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 MTND5P14-201ENST00000441481 1267 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 MTCO2P25-201ENST00000447065 681 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 MTND1P31-201ENST00000449206 961 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 AC087588.1-201ENST00000462203 316 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 MTND1P16-201ENST00000465177 898 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 HMGB1P36-201ENST00000487709 576 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 AC108729.1-201ENST00000487812 947 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 AC090096.1-201ENST00000489168 390 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 AC116353.3-201ENST00000511215 249 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 RNU6-528P-201ENST00000516926 100 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 SNORA31.22-201ENST00000517204 135 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 COX6CP8-201ENST00000522620 226 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 DEFB131D-201ENST00000526803 184 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 OR4R1P-201ENST00000529879 463 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 CYCSP2-201ENST00000558168 301 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 AC009163.5-201ENST00000575421 637 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 MIR4509-3-201ENST00000578671 94 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 MIR4509-2-201ENST00000583920 94 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 AP001269.3-201ENST00000588718 329 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 AC007619.2-201ENST00000605743 379 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 AL391834.2-201ENST00000609982 546 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 MIR4509-1-201ENST00000618224 94 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 AP001002.2-201ENST00000625137 386 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 AL079343.1-201ENST00000572358 1771 ntBASIC2.2□□□□□ -2.06
EXOSC4Q9NPD3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 MIR21-201ENST00000362134 72 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 RNU6-289P-201ENST00000364093 107 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 Y_RNA.311-201ENST00000365068 96 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 RNU6-1035P-201ENST00000384477 107 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 U3.37-201ENST00000408528 213 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AC099548.1-201ENST00000421443 426 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 MTCO2P23-201ENST00000425216 680 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 GTF2IP20-201ENST00000431663 360 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AL121871.1-201ENST00000443413 436 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AC009237.8-201ENST00000445492 379 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 EEF1E1P1-201ENST00000446998 430 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AL009048.1-201ENST00000450437 298 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AC107626.1-201ENST00000471084 183 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AL049874.1-201ENST00000489560 388 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AC134050.1-201ENST00000495088 933 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 EIF4EP3-201ENST00000498782 656 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms