Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC141273.2-201ENST00000618989 130 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 MIR4496-201ENST00000635896 61 ntBASIC4.75□□□□□ -1.65
SSU72Q9NP77 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSU72Q9NP77 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSU72Q9NP77 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSU72Q9NP77 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.75□□□□□ -1.65
SSU72Q9NP77 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSU72Q9NP77 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSU72Q9NP77 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 Y_RNA.60-201ENST00000362831 98 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 RNA5SP28-201ENST00000363841 119 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 Y_RNA.276-201ENST00000364732 109 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 Y_RNA.577-201ENST00000384794 101 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 RNU6-817P-201ENST00000391083 104 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 DUTP5-201ENST00000406790 469 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 CYCSP33-201ENST00000414485 327 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 BX842559.1-201ENST00000419615 532 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 RBMY1KP-201ENST00000423480 476 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 AL031274.1-201ENST00000450334 232 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 RPL23AP31-201ENST00000456160 467 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 FTH1P2-201ENST00000466086 412 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 RPS26P28-201ENST00000470806 348 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 RN7SL717P-201ENST00000478343 297 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 AC012158.1-204ENST00000483430 465 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 AC087369.1-201ENST00000520775 996 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 IGHV3-76-201ENST00000522465 295 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 AC008489.1-201ENST00000524271 483 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 AC100770.1-201ENST00000532310 322 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 MTND6P33-201ENST00000571794 183 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 AC011447.4-201ENST00000587562 111 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 AC067852.4-201ENST00000590314 478 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 AL499605.1-201ENST00000604628 403 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 MTND4LP5-201ENST00000605152 292 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 AC004805.2-201ENST00000605382 482 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 MIR6837-201ENST00000620884 64 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 BRAFP1-201ENST00000445336 2703 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSU72Q9NP77 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSU72Q9NP77 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 IRF5P1-201ENST00000504852 2164 ntBASIC4.74□□□□□ -1.65
SSU72Q9NP77 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.74□□□□□ -1.65
SSU72Q9NP77 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSU72Q9NP77 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSU72Q9NP77 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SSU72Q9NP77 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSU72Q9NP77 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSU72Q9NP77 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 RNU1-43P-201ENST00000365052 165 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 AL590762.2-201ENST00000395798 571 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 RNU2-38P-201ENST00000410856 79 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 RN7SKP216-201ENST00000411050 312 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 AF186996.5-201ENST00000418098 904 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 UBE2D3P2-201ENST00000424409 445 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 AL353997.1-201ENST00000432936 108 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 RPL7L1P1-201ENST00000448259 785 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 PCMTD1P1-201ENST00000455560 355 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 snoU13.3-201ENST00000459441 104 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 RN7SL168P-201ENST00000463821 279 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 RPL31P60-201ENST00000478450 367 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 AP000926.1-201ENST00000479573 241 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 AC018437.1-201ENST00000492214 406 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 HMGB3P17-201ENST00000504195 649 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 MRPS33P2-201ENST00000507850 322 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 RN7SKP234-201ENST00000517173 224 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.73□□□□□ -1.65
SSU72Q9NP77 CBX3P8-201ENST00000532412 525 ntBASIC4.73□□□□□ -1.65
SSU72Q9NP77 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms