Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 MTCYBP43-201ENST00000513621 740 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 MTCO2P32-201ENST00000514865 403 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 RN7SKP24-201ENST00000515888 284 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 MIR4672-201ENST00000583126 81 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 AC090186.1-201ENST00000605991 572 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 MIR6733-201ENST00000635723 61 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 FTLP6-201ENST00000355274 422 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 Y_RNA.234-201ENST00000364409 97 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 DEFB109C-201ENST00000382575 264 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 DEFB109B-201ENST00000382656 264 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 MTCO3P12-201ENST00000416718 547 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 VPS26BP1-201ENST00000417155 755 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AL593851.1-201ENST00000426171 157 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AL445669.1-201ENST00000426743 755 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 MTND1P20-201ENST00000430341 950 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 SETP8-201ENST00000435341 628 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 HIGD1AP11-201ENST00000438361 280 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AC104308.1-201ENST00000454621 333 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 RPL30P9-201ENST00000465586 330 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 SNORA3.4-201ENST00000515969 96 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 RNA5SP320-201ENST00000516263 124 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 RNA5SP148-201ENST00000516527 94 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 RNU6-714P-201ENST00000516963 103 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AP003497.1-201ENST00000528472 562 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AC128657.1-201ENST00000549459 145 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 ISCA1P3-201ENST00000577104 373 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AC090615.1-201ENST00000577519 154 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 NRBF2P5-201ENST00000603087 788 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AL139344.1-201ENST00000605228 195 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AL355810.1-201ENST00000614629 552 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AL360181.4-201ENST00000621752 134 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 LRRC77P-213ENST00000637727 880 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AC103706.2-201ENST00000638080 240 ntBASIC2.98□□□□□ -1.93
RNF41Q9H4P4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.98□□□□□ -1.93
RNF41Q9H4P4 AC116096.1-201ENST00000566804 2314 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AC103988.1-201ENST00000566382 2177 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AL672167.1-206ENST00000356293 943 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 RNA5SP456-201ENST00000364002 114 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 RNU6-723P-201ENST00000383973 107 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 RNU6-1074P-201ENST00000383995 104 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AC011233.1-201ENST00000422812 283 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AL354941.1-201ENST00000438600 464 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 LSM1P1-201ENST00000438629 273 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 RPL21P2-201ENST00000440049 481 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.97□□□□□ -1.93
RNF41Q9H4P4 SNORD121B-201ENST00000458838 81 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 RPS26P21-201ENST00000475397 348 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AC126389.1-201ENST00000477436 290 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 RPS27AP9-201ENST00000477681 438 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.97□□□□□ -1.93
RNF41Q9H4P4 CKS1BP7-201ENST00000522230 235 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AC239860.2-201ENST00000525886 270 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 MTATP6P15-201ENST00000527233 835 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 DUXAP5-201ENST00000529668 529 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.97□□□□□ -1.93
RNF41Q9H4P4 ELOCP32-201ENST00000548625 324 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF41Q9H4P4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AC010653.1-201ENST00000571108 881 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 OR4K8P-201ENST00000578842 1048 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 BBIP1P1-201ENST00000602999 279 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 DUXAP11-201ENST00000603858 526 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AC106791.2-201ENST00000604680 391 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 AC018638.7-201ENST00000605836 1114 ntBASIC2.97□□□□□ -1.93
RNF41Q9H4P4 RNU6-88P-201ENST00000606801 100 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms