Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 Y_RNA.675-201ENST00000516389 149 ntBASIC2.03□□□□□ -2.08
SCAPERQ9BY12 AP003033.1-201ENST00000527244 415 ntBASIC2.03□□□□□ -2.08
SCAPERQ9BY12 AC008083.4-201ENST00000615076 444 ntBASIC2.03□□□□□ -2.08
SCAPERQ9BY12 AC068831.7-201ENST00000616954 363 ntBASIC2.03□□□□□ -2.08
SCAPERQ9BY12 RNA5SP325-201ENST00000363756 130 ntBASIC2.02□□□□□ -2.09
SCAPERQ9BY12 CKS1BP5-201ENST00000434172 273 ntBASIC2.02□□□□□ -2.09
SCAPERQ9BY12 AC107398.1-201ENST00000486904 505 ntBASIC2.02□□□□□ -2.09
SCAPERQ9BY12 KLRA1P-201ENST00000503499 986 ntBASIC2.02□□□□□ -2.09
SCAPERQ9BY12 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.02□□□□□ -2.09
SCAPERQ9BY12 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.02□□□□□ -2.09
SCAPERQ9BY12 AC013553.2-201ENST00000604244 589 ntBASIC2.02□□□□□ -2.09
SCAPERQ9BY12 AC113194.1-201ENST00000606037 500 ntBASIC2.02□□□□□ -2.09
SCAPERQ9BY12 AL138880.1-201ENST00000405824 642 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 AL023807.1-201ENST00000407932 359 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 SNORD56-201ENST00000413522 71 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 MTCYBP7-201ENST00000419540 1134 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 RPL21P66-201ENST00000426566 466 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 ELOCP11-201ENST00000436690 332 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 OR10R1P-201ENST00000441524 1141 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 CALM1P1-201ENST00000442082 433 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 ELOCP16-201ENST00000444494 332 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.01□□□□□ -2.09
SCAPERQ9BY12 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.01□□□□□ -2.09
SCAPERQ9BY12 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.01□□□□□ -2.09
SCAPERQ9BY12 MTCYBP41-201ENST00000528913 1123 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SCAPERQ9BY12 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.01□□□□□ -2.09
SCAPERQ9BY12 AC015849.6-201ENST00000605454 474 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 AC245884.12-201ENST00000615364 59 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 AC025016.1-201ENST00000616746 682 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 AC012640.5-201ENST00000623897 319 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 AC007342.9-201ENST00000623877 1385 ntBASIC2.01□□□□□ -2.09
SCAPERQ9BY12 RNA5SP363-201ENST00000365072 115 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 HMGN2P30-201ENST00000423237 256 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 AC090774.1-201ENST00000435925 246 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 RPL35AP22-201ENST00000436855 335 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 MTND1P18-201ENST00000448191 573 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 AC092155.2-201ENST00000454675 477 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 SNORD121B-201ENST00000458838 81 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 MTCO3P35-201ENST00000485582 781 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 AC110792.2-201ENST00000510278 224 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2□□□□□ -2.09
SCAPERQ9BY12 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2□□□□□ -2.09
SCAPERQ9BY12 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2□□□□□ -2.09
SCAPERQ9BY12 FAM106DP-201ENST00000586416 501 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2□□□□□ -2.09
SCAPERQ9BY12 AC084373.1-201ENST00000603311 235 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2□□□□□ -2.09
SCAPERQ9BY12 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2□□□□□ -2.09
SCAPERQ9BY12 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SCAPERQ9BY12 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SCAPERQ9BY12 AC011477.1-204ENST00000623416 1325 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2□□□□□ -2.09
SCAPERQ9BY12 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
SCAPERQ9BY12 SNORA14A-201ENST00000364773 135 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 RNU6-1080P-201ENST00000383982 107 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 SLC9B1P2-201ENST00000398120 1184 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 RPS12P24-201ENST00000412619 387 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2□□□□□ -2.09
SCAPERQ9BY12 MTND4P11-201ENST00000417020 1058 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2□□□□□ -2.09
SCAPERQ9BY12 HMGN2P18-201ENST00000450680 270 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 AC092991.1-201ENST00000477176 376 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 LARP7P4-201ENST00000481075 878 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
SCAPERQ9BY12 AC113155.1-201ENST00000511141 769 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 RNU6-1223P-201ENST00000517124 104 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2□□□□□ -2.09
SCAPERQ9BY12 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2□□□□□ -2.09
SCAPERQ9BY12 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2□□□□□ -2.09
SCAPERQ9BY12 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2□□□□□ -2.09
SCAPERQ9BY12 MIR151B-201ENST00000584249 96 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2□□□□□ -2.09
SCAPERQ9BY12 MIR6788-201ENST00000618842 66 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 AC091932.3-201ENST00000624223 323 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 AL356118.1-201ENST00000635272 1078 ntBASIC2□□□□□ -2.09
SCAPERQ9BY12 AL390862.1-201ENST00000635467 1469 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SCAPERQ9BY12 RNU6-799P-201ENST00000363567 107 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 MIR320B1-201ENST00000390209 79 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 DNAJC19P6-201ENST00000401853 280 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 RPL7P27-201ENST00000403775 720 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 AL591034.1-201ENST00000407447 340 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 AC007098.1-201ENST00000420122 367 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 PGBD4P6-201ENST00000421501 610 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 GTF2IP7-202ENST00000436677 309 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 MED6P1-201ENST00000439659 713 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 AL513321.1-201ENST00000441175 761 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 HMGB1P38-201ENST00000490557 577 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 AC006390.1-201ENST00000508068 283 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 AC025423.2-201ENST00000537570 439 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.99□□□□□ -2.09
SCAPERQ9BY12 AC002487.1-201ENST00000604565 994 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 AC097468.3-201ENST00000607956 456 ntBASIC1.99□□□□□ -2.09
SCAPERQ9BY12 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SCAPERQ9BY12 MTND3P24-201ENST00000506306 329 ntBASIC1.98□□□□□ -2.09
SCAPERQ9BY12 RNU6-1073P-201ENST00000517182 106 ntBASIC1.98□□□□□ -2.09
SCAPERQ9BY12 NPM1P52-201ENST00000518264 846 ntBASIC1.98□□□□□ -2.09
SCAPERQ9BY12 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.98□□□□□ -2.09
SCAPERQ9BY12 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms