Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 MTND2P9-201ENST00000422293 931 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 RPL7P37-201ENST00000425095 738 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.37□□□□□ -2.03
FOXC2Q99958 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 RPS12P18-201ENST00000442381 270 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.37□□□□□ -2.03
FOXC2Q99958 ARPC3P5-201ENST00000448802 534 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
FOXC2Q99958 RPL18AP17-201ENST00000455326 198 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 AL590639.1-201ENST00000456484 337 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.37□□□□□ -2.03
FOXC2Q99958 RNU7-23P-201ENST00000459465 62 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 RN7SL20P-201ENST00000488827 297 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 AP001025.2-201ENST00000490908 477 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 RPS27P26-201ENST00000494583 239 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 GTF2IP9-201ENST00000502460 301 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.37□□□□□ -2.03
FOXC2Q99958 AC118282.1-201ENST00000506408 765 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 Y_RNA.676-201ENST00000516393 96 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 RNA5SP148-201ENST00000516527 94 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 MTND2P32-201ENST00000521584 1038 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 IGKV3-31-201ENST00000523109 329 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.37□□□□□ -2.03
FOXC2Q99958 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.37□□□□□ -2.03
FOXC2Q99958 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.37□□□□□ -2.03
FOXC2Q99958 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.37□□□□□ -2.03
FOXC2Q99958 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.37□□□□□ -2.03
FOXC2Q99958 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.37□□□□□ -2.03
FOXC2Q99958 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.37□□□□□ -2.03
FOXC2Q99958 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.37□□□□□ -2.03
FOXC2Q99958 AC106052.1-201ENST00000608029 497 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 AL157392.4-201ENST00000609756 345 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 AP000240.1-201ENST00000609910 452 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.37□□□□□ -2.03
FOXC2Q99958 CTSLP2-204ENST00000629029 392 ntBASIC2.37□□□□□ -2.03
FOXC2Q99958 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
FOXC2Q99958 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
FOXC2Q99958 ZNF29P-201ENST00000225587 168 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 RNU1-105P-201ENST00000363470 161 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 SNORD116-12-201ENST00000384468 92 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
FOXC2Q99958 RNU6-482P-201ENST00000391068 107 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 RNA5SP492-201ENST00000411330 114 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AL592148.1-201ENST00000413568 445 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 RPL7P10-201ENST00000417407 739 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.36□□□□□ -2.03
FOXC2Q99958 AC009414.1-201ENST00000427200 443 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AC093151.1-201ENST00000427711 313 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AL512844.2-201ENST00000433990 593 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.36□□□□□ -2.03
FOXC2Q99958 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.36□□□□□ -2.03
FOXC2Q99958 AL162389.1-201ENST00000449233 177 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 ZNF886P-201ENST00000450781 723 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 SNORD121B-201ENST00000458838 81 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AC011979.1-201ENST00000472300 483 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AL049874.1-201ENST00000489560 388 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.36□□□□□ -2.03
FOXC2Q99958 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.36□□□□□ -2.03
FOXC2Q99958 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.36□□□□□ -2.03
FOXC2Q99958 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.36□□□□□ -2.03
FOXC2Q99958 TTC39CP1-201ENST00000512513 755 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AC006499.2-201ENST00000513470 337 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.36□□□□□ -2.03
FOXC2Q99958 AC124947.2-202ENST00000552735 133 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 SETP2-201ENST00000553886 926 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.36□□□□□ -2.03
FOXC2Q99958 AL132857.1-201ENST00000555180 708 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AL158211.4-201ENST00000606988 584 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.36□□□□□ -2.03
FOXC2Q99958 AC131902.3-201ENST00000611767 581 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
FOXC2Q99958 AC009159.1-201ENST00000618386 642 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AL445264.1-201ENST00000621719 171 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AC008443.7-201ENST00000622195 246 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.36□□□□□ -2.03
FOXC2Q99958 AL078595.3-201ENST00000623815 1166 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 MIR4275-201ENST00000636486 87 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
FOXC2Q99958 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.36□□□□□ -2.03
FOXC2Q99958 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.36□□□□□ -2.03
FOXC2Q99958 AC026241.1-201ENST00000517873 2142 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AC106754.1-201ENST00000562632 1513 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
FOXC2Q99958 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
FOXC2Q99958 MTND5P24-201ENST00000438892 1767 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 AL079343.1-201ENST00000572358 1771 ntBASIC2.36□□□□□ -2.03
FOXC2Q99958 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
FOXC2Q99958 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
FOXC2Q99958 AC007785.2-201ENST00000598627 1916 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
FOXC2Q99958 RNU6-1180P-201ENST00000364935 107 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 U8.9-201ENST00000365667 134 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 Y_RNA.548-201ENST00000384656 105 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 MIR325-201ENST00000385260 98 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 RPL21P75-201ENST00000396599 483 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 RPL21P28-201ENST00000401418 483 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 AL592114.1-201ENST00000403842 483 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms