Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNU6-837P-201ENST00000391056 108 ntBASIC4.03□□□□□ -1.76
SMOQ99835 RNU6-332P-201ENST00000391193 108 ntBASIC4.03□□□□□ -1.76
SMOQ99835 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMOQ99835 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.03□□□□□ -1.76
SMOQ99835 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.03□□□□□ -1.76
SMOQ99835 AC114491.1-201ENST00000416095 246 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.03□□□□□ -1.76
SMOQ99835 AL139247.1-201ENST00000422768 325 ntBASIC4.03□□□□□ -1.76
SMOQ99835 GAPDHP27-201ENST00000447427 1020 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AL500522.2-201ENST00000448562 343 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AL162389.1-201ENST00000449233 177 ntBASIC4.03□□□□□ -1.76
SMOQ99835 ELOCP23-201ENST00000452014 332 ntBASIC4.03□□□□□ -1.76
SMOQ99835 RNU7-182P-201ENST00000459009 62 ntBASIC4.03□□□□□ -1.76
SMOQ99835 RPL7L1P8-201ENST00000469911 741 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.03□□□□□ -1.76
SMOQ99835 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SMOQ99835 MTND3P22-201ENST00000510932 243 ntBASIC4.03□□□□□ -1.76
SMOQ99835 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.03□□□□□ -1.76
SMOQ99835 AC026801.2-201ENST00000515352 425 ntBASIC4.03□□□□□ -1.76
SMOQ99835 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.03□□□□□ -1.76
SMOQ99835 HMGN1P28-201ENST00000521340 364 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AC007991.1-201ENST00000522680 631 ntBASIC4.03□□□□□ -1.76
SMOQ99835 OR5AL2P-201ENST00000532185 920 ntBASIC4.03□□□□□ -1.76
SMOQ99835 OR5B10P-201ENST00000532869 642 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AC023050.3-201ENST00000541142 333 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AC090877.1-201ENST00000561418 344 ntBASIC4.03□□□□□ -1.76
SMOQ99835 MIR4719-201ENST00000585233 84 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.03□□□□□ -1.76
SMOQ99835 AL356055.1-201ENST00000602528 446 ntBASIC4.03□□□□□ -1.76
SMOQ99835 XIAPP1-201ENST00000603162 600 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AL034351.1-201ENST00000605288 668 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AC005344.1-201ENST00000613391 459 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AL121772.2-201ENST00000614331 297 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AC004696.1-201ENST00000614345 607 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AL450472.3-201ENST00000615578 367 ntBASIC4.03□□□□□ -1.76
SMOQ99835 MIR6130-201ENST00000619419 109 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AC090617.10-201ENST00000624308 134 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AL359697.1-201ENST00000624879 587 ntBASIC4.03□□□□□ -1.76
SMOQ99835 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.03□□□□□ -1.76
SMOQ99835 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.03□□□□□ -1.76
SMOQ99835 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SMOQ99835 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
SMOQ99835 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
SMOQ99835 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.02□□□□□ -1.77
SMOQ99835 AC004972.1-201ENST00000623934 2209 ntBASIC4.02□□□□□ -1.77
SMOQ99835 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SMOQ99835 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SMOQ99835 AC073343.1-201ENST00000328239 651 ntBASIC4.02□□□□□ -1.77
SMOQ99835 Y_RNA.813-201ENST00000364639 102 ntBASIC4.02□□□□□ -1.77
SMOQ99835 RNU4-20P-201ENST00000365601 151 ntBASIC4.02□□□□□ -1.77
SMOQ99835 RNU6-1029P-201ENST00000384109 107 ntBASIC4.02□□□□□ -1.77
SMOQ99835 RNU6-767P-201ENST00000384132 107 ntBASIC4.02□□□□□ -1.77
SMOQ99835 SOD2P1-201ENST00000396543 562 ntBASIC4.02□□□□□ -1.77
SMOQ99835 PDCL2P1-201ENST00000419302 352 ntBASIC4.02□□□□□ -1.77
SMOQ99835 AL591419.1-201ENST00000427423 339 ntBASIC4.02□□□□□ -1.77
SMOQ99835 SRIP2-201ENST00000428470 166 ntBASIC4.02□□□□□ -1.77
SMOQ99835 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.02□□□□□ -1.77
SMOQ99835 SNORA71B-202ENST00000439232 272 ntBASIC4.02□□□□□ -1.77
SMOQ99835 NOTCH2P1-201ENST00000443481 624 ntBASIC4.02□□□□□ -1.77
SMOQ99835 CBWD4P-201ENST00000445695 655 ntBASIC4.02□□□□□ -1.77
SMOQ99835 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.02□□□□□ -1.77
SMOQ99835 AC008481.1-201ENST00000463278 396 ntBASIC4.02□□□□□ -1.77
SMOQ99835 RPL38P4-201ENST00000502376 214 ntBASIC4.02□□□□□ -1.77
SMOQ99835 RAC1P2-201ENST00000511164 579 ntBASIC4.02□□□□□ -1.77
SMOQ99835 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.02□□□□□ -1.77
SMOQ99835 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.02□□□□□ -1.77
SMOQ99835 AC100870.1-201ENST00000522035 505 ntBASIC4.02□□□□□ -1.77
SMOQ99835 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.02□□□□□ -1.77
SMOQ99835 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.02□□□□□ -1.77
SMOQ99835 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.02□□□□□ -1.77
SMOQ99835 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.02□□□□□ -1.77
SMOQ99835 AC024619.4-201ENST00000580924 316 ntBASIC4.02□□□□□ -1.77
SMOQ99835 AC012443.1-201ENST00000605605 231 ntBASIC4.02□□□□□ -1.77
SMOQ99835 AC039056.2-201ENST00000622261 511 ntBASIC4.02□□□□□ -1.77
SMOQ99835 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMOQ99835 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.02□□□□□ -1.77
SMOQ99835 AP004289.2-201ENST00000444413 1457 ntBASIC4.02□□□□□ -1.77
SMOQ99835 AC008725.1-201ENST00000605123 2263 ntBASIC4.02□□□□□ -1.77
SMOQ99835 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.02□□□□□ -1.77
SMOQ99835 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMOQ99835 MTND5P17-201ENST00000418405 1603 ntBASIC4.02□□□□□ -1.77
SMOQ99835 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMOQ99835 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMOQ99835 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMOQ99835 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SMOQ99835 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SMOQ99835 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SMOQ99835 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SMOQ99835 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SMOQ99835 RNU6-845P-201ENST00000362578 103 ntBASIC4.01□□□□□ -1.77
SMOQ99835 MIR554-201ENST00000384874 96 ntBASIC4.01□□□□□ -1.77
SMOQ99835 UBE2V1P2-201ENST00000397758 440 ntBASIC4.01□□□□□ -1.77
SMOQ99835 AL590704.1-201ENST00000402856 794 ntBASIC4.01□□□□□ -1.77
SMOQ99835 AL162578.1-201ENST00000406202 378 ntBASIC4.01□□□□□ -1.77
SMOQ99835 RNU6-1148P-201ENST00000410992 104 ntBASIC4.01□□□□□ -1.77
SMOQ99835 AC087650.1-201ENST00000431445 468 ntBASIC4.01□□□□□ -1.77
SMOQ99835 AC007389.2-201ENST00000434630 306 ntBASIC4.01□□□□□ -1.77
SMOQ99835 MTCO3P45-201ENST00000443036 613 ntBASIC4.01□□□□□ -1.77
SMOQ99835 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SMOQ99835 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms