Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 RPL21P10-201ENST00000463521 490 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 RPL31P60-201ENST00000478450 367 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 AP000797.1-201ENST00000478870 387 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC63Q8NA47 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC63Q8NA47 AL359273.1-201ENST00000510918 627 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 PAICSP4-201ENST00000517543 1253 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 TRMT10BP1-201ENST00000519377 943 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC63Q8NA47 MTCO1P47-201ENST00000523889 1271 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 MTND4LP18-201ENST00000526864 291 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.09□□□□□ -1.91
CCDC63Q8NA47 HIGD1AP5-201ENST00000529959 259 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 AP000907.2-201ENST00000530827 353 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 AP000857.1-201ENST00000532151 543 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC63Q8NA47 MIR2682-201ENST00000580305 110 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 Z99497.2-201ENST00000603634 310 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 AC007038.2-201ENST00000608095 740 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 OR10AB1P-201ENST00000609613 938 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 AC131902.3-201ENST00000611767 581 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 AC027807.2-201ENST00000616099 408 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC63Q8NA47 AC091931.1-201ENST00000623488 728 ntBASIC3.09□□□□□ -1.91
CCDC63Q8NA47 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CCDC63Q8NA47 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
CCDC63Q8NA47 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC63Q8NA47 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC63Q8NA47 RNU6-533P-201ENST00000384144 107 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 MIR514A1-201ENST00000385133 98 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 MT-TH-201ENST00000387441 69 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 SNORA26.8-201ENST00000391306 124 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 RPS4XP3-201ENST00000398541 413 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AL590004.2-201ENST00000404787 371 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 FAT1P1-201ENST00000406588 507 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 RN7SKP202-201ENST00000410439 330 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 RNA5SP38-201ENST00000410750 119 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 UBE2FP1-201ENST00000416536 447 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 USP9YP13-201ENST00000417797 480 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AC018630.2-202ENST00000422992 927 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC63Q8NA47 CYCSP46-201ENST00000423569 204 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC63Q8NA47 MED14P1-201ENST00000430517 648 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AC007389.2-201ENST00000434630 306 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC63Q8NA47 NDUFB4P6-201ENST00000436819 366 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 RPL21P2-201ENST00000440049 481 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AC103987.1-201ENST00000473394 348 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 RPL23AP11-201ENST00000475260 469 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 RPS27AP9-201ENST00000477681 438 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 RN7SL633P-201ENST00000488974 297 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AL049874.1-201ENST00000489560 388 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 RPS15AP36-201ENST00000492022 382 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AC010486.3-201ENST00000511602 785 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AF131216.2-201ENST00000512316 564 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 RNU6-201P-201ENST00000517100 61 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 RNU1-45P-201ENST00000517191 141 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AC060788.1-201ENST00000521318 469 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AC123904.2-201ENST00000548059 300 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AC011611.1-201ENST00000552179 197 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AL356432.3-201ENST00000568952 465 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AF131215.7-201ENST00000602443 707 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AC012065.4-201ENST00000602445 679 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AC068790.3-201ENST00000602988 553 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AL359198.2-201ENST00000611836 194 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AC009159.1-201ENST00000618386 642 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 ASNSP3-201ENST00000451989 1306 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AL161431.1-201ENST00000618966 4205 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 AC009487.2-201ENST00000420969 6821 ntBASIC3.08□□□□□ -1.92
CCDC63Q8NA47 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC63Q8NA47 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC63Q8NA47 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC63Q8NA47 OR4G2P-202ENST00000641004 1759 ntBASIC3.07□□□□□ -1.92
CCDC63Q8NA47 SDAD1P2-201ENST00000441308 2028 ntBASIC3.07□□□□□ -1.92
CCDC63Q8NA47 RNA5SP515-201ENST00000364570 118 ntBASIC3.07□□□□□ -1.92
CCDC63Q8NA47 SNORA14A-201ENST00000364773 135 ntBASIC3.07□□□□□ -1.92
CCDC63Q8NA47 SNORD115.1-201ENST00000391109 76 ntBASIC3.07□□□□□ -1.92
CCDC63Q8NA47 AL109755.1-201ENST00000401791 649 ntBASIC3.07□□□□□ -1.92
CCDC63Q8NA47 MIR1290-201ENST00000408735 78 ntBASIC3.07□□□□□ -1.92
CCDC63Q8NA47 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC63Q8NA47 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC63Q8NA47 AL353777.1-201ENST00000425552 326 ntBASIC3.07□□□□□ -1.92
CCDC63Q8NA47 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC63Q8NA47 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC63Q8NA47 AL049714.1-201ENST00000466686 347 ntBASIC3.07□□□□□ -1.92
CCDC63Q8NA47 RPL21P13-201ENST00000488305 481 ntBASIC3.07□□□□□ -1.92
CCDC63Q8NA47 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC63Q8NA47 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC63Q8NA47 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC63Q8NA47 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC63Q8NA47 MIR548AB-201ENST00000584917 84 ntBASIC3.07□□□□□ -1.92
CCDC63Q8NA47 MIR3922-201ENST00000585192 84 ntBASIC3.07□□□□□ -1.92
CCDC63Q8NA47 AL606834.2-201ENST00000602954 668 ntBASIC3.07□□□□□ -1.92
CCDC63Q8NA47 AC004908.2-201ENST00000609090 574 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms