Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MIR514B-201ENST00000516774 80 ntBASIC1.99□□□□□ -2.09
VPS8Q8N3P4 RNU2-44P-201ENST00000516795 194 ntBASIC1.99□□□□□ -2.09
VPS8Q8N3P4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.99□□□□□ -2.09
VPS8Q8N3P4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.99□□□□□ -2.09
VPS8Q8N3P4 AC012640.5-201ENST00000623897 319 ntBASIC1.99□□□□□ -2.09
VPS8Q8N3P4 AC110079.1-202ENST00000635213 138 ntBASIC1.99□□□□□ -2.09
VPS8Q8N3P4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VPS8Q8N3P4 AC233981.2-201ENST00000611524 1614 ntBASIC1.98□□□□□ -2.09
VPS8Q8N3P4 RNU6-697P-201ENST00000363348 107 ntBASIC1.98□□□□□ -2.09
VPS8Q8N3P4 SNORA38-201ENST00000363946 132 ntBASIC1.98□□□□□ -2.09
VPS8Q8N3P4 AL137159.1-201ENST00000452808 512 ntBASIC1.98□□□□□ -2.09
VPS8Q8N3P4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS8Q8N3P4 AC087272.1-201ENST00000523624 533 ntBASIC1.98□□□□□ -2.09
VPS8Q8N3P4 AP002748.2-201ENST00000528671 348 ntBASIC1.98□□□□□ -2.09
VPS8Q8N3P4 AC090616.3-201ENST00000582184 217 ntBASIC1.98□□□□□ -2.09
VPS8Q8N3P4 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS8Q8N3P4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS8Q8N3P4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
VPS8Q8N3P4 AC004520.1-201ENST00000608362 1413 ntBASIC1.97□□□□□ -2.09
VPS8Q8N3P4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.97□□□□□ -2.09
VPS8Q8N3P4 AC244505.5-201ENST00000443639 207 ntBASIC1.97□□□□□ -2.09
VPS8Q8N3P4 PSPHP1-201ENST00000450062 261 ntBASIC1.97□□□□□ -2.09
VPS8Q8N3P4 KLRA1P-201ENST00000503499 986 ntBASIC1.97□□□□□ -2.09
VPS8Q8N3P4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS8Q8N3P4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.97□□□□□ -2.09
VPS8Q8N3P4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
VPS8Q8N3P4 NUP35P2-201ENST00000416748 943 ntBASIC1.96□□□□□ -2.1
VPS8Q8N3P4 RPS6P15-201ENST00000431996 751 ntBASIC1.96□□□□□ -2.1
VPS8Q8N3P4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.96□□□□□ -2.1
VPS8Q8N3P4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS8Q8N3P4 AL445687.1-201ENST00000439946 251 ntBASIC1.96□□□□□ -2.1
VPS8Q8N3P4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.96□□□□□ -2.1
VPS8Q8N3P4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.96□□□□□ -2.1
VPS8Q8N3P4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS8Q8N3P4 AC090821.2-201ENST00000523552 176 ntBASIC1.96□□□□□ -2.1
VPS8Q8N3P4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.96□□□□□ -2.1
VPS8Q8N3P4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.96□□□□□ -2.1
VPS8Q8N3P4 AP000560.1-201ENST00000624150 1937 ntBASIC1.96□□□□□ -2.1
VPS8Q8N3P4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS8Q8N3P4 RPL21P32-201ENST00000419877 477 ntBASIC1.95□□□□□ -2.1
VPS8Q8N3P4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.95□□□□□ -2.1
VPS8Q8N3P4 RNA5SP102-201ENST00000516865 106 ntBASIC1.95□□□□□ -2.1
VPS8Q8N3P4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS8Q8N3P4 MIR7974-201ENST00000615835 79 ntBASIC1.95□□□□□ -2.1
VPS8Q8N3P4 AC018755.4-201ENST00000619715 454 ntBASIC1.95□□□□□ -2.1
VPS8Q8N3P4 AC095031.1-201ENST00000623685 672 ntBASIC1.95□□□□□ -2.1
VPS8Q8N3P4 AC009902.3-201ENST00000606235 2172 ntBASIC1.95□□□□□ -2.1
VPS8Q8N3P4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VPS8Q8N3P4 AC244033.1-201ENST00000426826 870 ntBASIC1.94□□□□□ -2.1
VPS8Q8N3P4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS8Q8N3P4 ATG12P2-201ENST00000456830 416 ntBASIC1.94□□□□□ -2.1
VPS8Q8N3P4 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS8Q8N3P4 CYCSP26-201ENST00000534107 320 ntBASIC1.94□□□□□ -2.1
VPS8Q8N3P4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
VPS8Q8N3P4 TRAV28-201ENST00000557548 323 ntBASIC1.94□□□□□ -2.1
VPS8Q8N3P4 HSPE1P3-201ENST00000559254 309 ntBASIC1.94□□□□□ -2.1
VPS8Q8N3P4 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS8Q8N3P4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS8Q8N3P4 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.94□□□□□ -2.1
VPS8Q8N3P4 AC009090.3-201ENST00000616553 565 ntBASIC1.94□□□□□ -2.1
VPS8Q8N3P4 AC006338.1-201ENST00000618453 749 ntBASIC1.94□□□□□ -2.1
VPS8Q8N3P4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
VPS8Q8N3P4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VPS8Q8N3P4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.93□□□□□ -2.1
VPS8Q8N3P4 AP002784.2-201ENST00000397300 549 ntBASIC1.93□□□□□ -2.1
VPS8Q8N3P4 RPS4XP3-201ENST00000398541 413 ntBASIC1.93□□□□□ -2.1
VPS8Q8N3P4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
VPS8Q8N3P4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS8Q8N3P4 AC009296.1-201ENST00000443146 155 ntBASIC1.93□□□□□ -2.1
VPS8Q8N3P4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS8Q8N3P4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS8Q8N3P4 RNU7-26P-201ENST00000458980 63 ntBASIC1.93□□□□□ -2.1
VPS8Q8N3P4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.93□□□□□ -2.1
VPS8Q8N3P4 SNORA31.20-201ENST00000517111 133 ntBASIC1.93□□□□□ -2.1
VPS8Q8N3P4 MTND2P26-201ENST00000528255 1029 ntBASIC1.93□□□□□ -2.1
VPS8Q8N3P4 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS8Q8N3P4 MTND4LP24-201ENST00000572277 291 ntBASIC1.93□□□□□ -2.1
VPS8Q8N3P4 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS8Q8N3P4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
VPS8Q8N3P4 SNORA1.3-201ENST00000384676 136 ntBASIC1.92□□□□□ -2.1
VPS8Q8N3P4 RNA5SP498-201ENST00000411342 120 ntBASIC1.92□□□□□ -2.1
VPS8Q8N3P4 AC009414.1-201ENST00000427200 443 ntBASIC1.92□□□□□ -2.1
VPS8Q8N3P4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.92□□□□□ -2.1
VPS8Q8N3P4 RPS29P23-201ENST00000458635 123 ntBASIC1.92□□□□□ -2.1
VPS8Q8N3P4 SETP11-201ENST00000473027 690 ntBASIC1.92□□□□□ -2.1
VPS8Q8N3P4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.92□□□□□ -2.1
VPS8Q8N3P4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.92□□□□□ -2.1
VPS8Q8N3P4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VPS8Q8N3P4 MIR3117-201ENST00000584034 78 ntBASIC1.92□□□□□ -2.1
VPS8Q8N3P4 MIR6504-201ENST00000613520 61 ntBASIC1.92□□□□□ -2.1
VPS8Q8N3P4 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
VPS8Q8N3P4 Y_RNA.116-201ENST00000363292 103 ntBASIC1.91□□□□□ -2.1
VPS8Q8N3P4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.91□□□□□ -2.1
VPS8Q8N3P4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.91□□□□□ -2.1
VPS8Q8N3P4 PGBD4P6-201ENST00000421501 610 ntBASIC1.91□□□□□ -2.1
VPS8Q8N3P4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.91□□□□□ -2.1
VPS8Q8N3P4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.91□□□□□ -2.1
VPS8Q8N3P4 SDCBPP1-201ENST00000440192 890 ntBASIC1.91□□□□□ -2.1
VPS8Q8N3P4 GPM6BP3-201ENST00000442797 145 ntBASIC1.91□□□□□ -2.1
VPS8Q8N3P4 AC080013.2-201ENST00000460866 323 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms