Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 TPT1P12-201ENST00000448968 492 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 NANOGP10-201ENST00000453325 895 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 MTND1P9-201ENST00000453775 944 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 CEACAMP4-201ENST00000457676 421 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AL049714.1-201ENST00000466686 347 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC025465.4-201ENST00000513422 638 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC046134.1-201ENST00000514454 666 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 SCARNA24.1-201ENST00000516465 137 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 RNA5SP309-201ENST00000516670 106 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 RNU6-798P-201ENST00000516912 103 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 OR4R3P-201ENST00000525084 838 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AF235103.2-201ENST00000525753 346 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 SETP7-201ENST00000552169 453 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 HIF1AP1-201ENST00000553642 175 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC037471.2-201ENST00000564941 598 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC090616.5-202ENST00000582111 297 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 MIR4697-201ENST00000582977 78 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC060780.3-201ENST00000589464 80 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC006254.3-201ENST00000603353 884 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 BNIP3P9-201ENST00000603714 553 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 IGHV3-29-201ENST00000604817 344 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 MIR6875-201ENST00000617506 72 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 ZYXP1-201ENST00000617638 118 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC005609.4-201ENST00000625071 447 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 MIR7153-201ENST00000637758 57 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AL138713.1-201ENST00000624026 2130 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 Y_RNA.160-201ENST00000363677 92 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 PTMAP5-201ENST00000393073 333 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 EI24P2-201ENST00000397776 1076 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AL583834.1-201ENST00000406943 343 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 SNORA57.3-201ENST00000411095 141 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 HMGN2P21-201ENST00000447764 270 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AC140076.1-201ENST00000449897 361 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AC108059.3-201ENST00000456388 214 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 snoU109.4-201ENST00000458953 143 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AC083798.1-201ENST00000472671 131 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AC018710.1-201ENST00000506509 158 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 PHBP14-201ENST00000512887 367 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AC114797.1-201ENST00000514003 728 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 Vault.1-201ENST00000516474 102 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AC093331.1-201ENST00000521474 169 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AC008489.1-201ENST00000524271 483 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 OR4R1P-201ENST00000529879 463 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AL133271.1-201ENST00000538229 291 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 OR4T1P-201ENST00000554933 911 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AC009994.1-201ENST00000606889 253 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 Y_RNA.804-201ENST00000615262 101 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 YWHAEP7-203ENST00000622054 312 ntBASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.42□□□□□ -1.86
CLIP4Q8N3C7 ZNF680P1-201ENST00000436625 1469 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC010733.2-201ENST00000589496 5702 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC090337.1-201ENST00000579651 2074 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 SNORD56.2-201ENST00000363242 71 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 RNU5E-8P-201ENST00000363502 116 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 RNU6-1078P-201ENST00000364522 103 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 SNORA69-201ENST00000383895 132 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 RNU6-1158P-201ENST00000391167 107 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 RN7SKP177-201ENST00000410567 355 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC092447.6-201ENST00000414578 210 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 MTND3P23-201ENST00000431980 347 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC079781.2-201ENST00000446424 169 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC022364.2-201ENST00000457963 554 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 MTCYBP18-201ENST00000501056 747 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC110768.1-201ENST00000509222 400 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms