Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 AL356473.1-201ENST00000406203 1408 ntBASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC65Q8IXS2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AL139276.1-201ENST00000311910 1001 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 DEFB108F-201ENST00000344638 222 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 RNU6-28P-201ENST00000362378 107 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 RNA5SP68-201ENST00000363885 119 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 Y_RNA.234-201ENST00000364409 97 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 MIR620-201ENST00000385232 95 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC098826.1-201ENST00000433943 471 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 MTND4P6-201ENST00000438297 472 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 RPS15AP7-201ENST00000439294 405 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC007327.1-201ENST00000447461 264 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC134050.1-201ENST00000495088 933 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 SNORA31.11-201ENST00000516528 139 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 RNU6-528P-201ENST00000516926 100 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 DEFB108D-201ENST00000527787 222 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 CYCSP2-201ENST00000558168 301 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC023813.2-201ENST00000564321 469 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC106782.4-201ENST00000568264 210 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC011890.2-201ENST00000613393 294 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AL590099.1-201ENST00000615276 138 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 MIR6817-201ENST00000615588 66 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC090132.2-201ENST00000615881 347 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC006386.1-201ENST00000619436 415 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AC011330.2-201ENST00000621680 635 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 AL445984.1-201ENST00000637834 659 ntBASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC65Q8IXS2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AC080100.1-201ENST00000624239 5356 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 Y_RNA.192-201ENST00000363977 102 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 SNORA41-201ENST00000384675 132 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 MTND5P14-201ENST00000441481 1267 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 SNORD121B-201ENST00000458838 81 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AP001486.1-201ENST00000463339 476 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 RPL30P9-201ENST00000465586 330 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 MRPL42P6-201ENST00000486397 371 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AC079395.1-201ENST00000510981 262 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 SUB1P1-201ENST00000524415 382 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AP001804.3-201ENST00000525146 880 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 UBTFL10-201ENST00000528532 562 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AC012321.1-201ENST00000561622 1588 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AL391834.2-201ENST00000609982 546 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AC006213.4-201ENST00000616184 634 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AC022306.3-201ENST00000619930 550 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AC090772.4-201ENST00000623599 362 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AC068880.5-201ENST00000624331 290 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 AC010608.3-201ENST00000625048 527 ntBASIC2.72□□□□□ -1.97
CCDC65Q8IXS2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CCDC65Q8IXS2 AC005539.1-201ENST00000443768 1479 ntBASIC2.71□□□□□ -1.97
CCDC65Q8IXS2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 MIR6073-201ENST00000352083 89 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 RNU6-525P-201ENST00000363685 104 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 RNU6-76P-201ENST00000384060 104 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 MIR518C-201ENST00000384822 101 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 RNU6-1242P-201ENST00000391052 103 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AL359511.1-201ENST00000402970 211 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AL122016.1-201ENST00000403365 367 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 PPP1R11P2-201ENST00000423543 382 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 FCF1P1-201ENST00000432690 571 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 THAP5P1-201ENST00000439089 262 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 EEF1A1P39-201ENST00000440791 250 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AC002381.1-201ENST00000447049 280 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 RPS3P1-201ENST00000456781 192 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 KC877373.1-201ENST00000479066 408 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 RPL23AP70-201ENST00000483361 460 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 RPS27P27-201ENST00000498779 255 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 RNA5SP148-201ENST00000516527 94 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms