Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AL135938.1-201ENST00000443141 297 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 RPL7P36-201ENST00000444633 681 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AC093392.2-201ENST00000450682 337 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 SSXP4-201ENST00000451349 245 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AC098826.2-201ENST00000452011 651 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AL590639.1-201ENST00000456484 337 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 MTCO2P6-201ENST00000463134 685 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 RN7SL499P-201ENST00000481141 276 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 RPS3AP14-201ENST00000483907 780 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AL359273.1-201ENST00000510918 627 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 RNU6-798P-201ENST00000516912 103 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 RNU6-232P-201ENST00000517144 64 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 SNORA31.26-201ENST00000517250 137 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 ERHP1-201ENST00000523006 310 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 FAM60DP-201ENST00000524174 632 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 EIF4BP1-201ENST00000554881 351 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 MTND3P12-201ENST00000559068 328 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AC034105.3-201ENST00000565294 442 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AL390240.1-201ENST00000612950 384 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AP000676.3-201ENST00000623299 569 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AC079248.2-201ENST00000623779 326 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AL159972.1-201ENST00000625150 448 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AL137790.1-201ENST00000634283 177 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 FAM35CP-201ENST00000554755 2470 ntBASIC2.67□□□□□ -1.98
C9orf40Q8IXQ3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 RNU6-525P-201ENST00000363685 104 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 RNU5A-2P-201ENST00000384337 116 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 MIR493-201ENST00000385254 89 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 SNORA26.7-201ENST00000391288 122 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 NDUFB4P4-201ENST00000404822 243 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 RPL27AP8-201ENST00000424277 446 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC091390.3-201ENST00000426478 338 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 RPS6P15-201ENST00000431996 751 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC107083.1-201ENST00000439643 279 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 NIPA2P5-201ENST00000452282 464 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 GSTA11P-201ENST00000452866 669 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AP1S2P1-201ENST00000457344 379 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 BZW1P2-201ENST00000473537 826 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC068587.2-201ENST00000478386 781 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC012181.1-201ENST00000479895 423 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 HMGN1P28-201ENST00000521340 364 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AL133271.1-201ENST00000538229 291 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AL157394.1-201ENST00000562983 1224 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 MIR3921-201ENST00000577308 85 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 MTCO3P13-201ENST00000577757 781 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC011471.1-201ENST00000585766 187 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC024153.1-201ENST00000603103 365 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC091965.4-201ENST00000607691 587 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AL356266.1-201ENST00000623311 483 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC097520.1-201ENST00000624435 385 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC091965.5-201ENST00000624785 342 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC019226.1-201ENST00000625666 515 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AC092125.1-201ENST00000562568 1995 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 AP003122.5-201ENST00000527668 3766 ntBASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.66□□□□□ -1.98
C9orf40Q8IXQ3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
C9orf40Q8IXQ3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
C9orf40Q8IXQ3 MTND5P33-201ENST00000571250 1450 ntBASIC2.65□□□□□ -1.98
C9orf40Q8IXQ3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
C9orf40Q8IXQ3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
C9orf40Q8IXQ3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 CCT4P2-201ENST00000233836 1548 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 RNU5A-1-201ENST00000362698 116 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 U8.9-201ENST00000365667 134 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 SNORA18.3-201ENST00000384122 132 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 U8.14-201ENST00000390843 143 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms