Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 RNU6-989P-201ENST00000362756 107 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 VTRNA1-1-201ENST00000363120 99 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 RNU6-777P-201ENST00000364265 104 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 RNVU1-3-201ENST00000364313 161 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 MT-TC-201ENST00000387405 66 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 RNU6-821P-201ENST00000390995 107 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 YPEL5P1-201ENST00000419731 367 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 PSMA6P3-201ENST00000428242 164 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 UBE2D3P4-201ENST00000441973 436 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 MTND2P4-201ENST00000445034 1004 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 RPS24P6-201ENST00000452670 400 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 RPS20P24-201ENST00000457473 361 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 RPL30P9-201ENST00000465586 330 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 OR2A20P-203ENST00000498397 1268 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 AC022447.3-201ENST00000506865 495 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 RN7SKP272-201ENST00000516988 232 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 AP005136.1-201ENST00000579765 429 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 UBL5P2-201ENST00000583788 219 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 AC112187.2-201ENST00000604345 283 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 AC009090.3-201ENST00000616553 565 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 U73479.1-201ENST00000618062 168 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 AL356596.1-201ENST00000624230 379 ntBASIC2.69□□□□□ -1.98
ZNF544Q6NX49 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.69□□□□□ -1.98
ZNF544Q6NX49 AC000403.1-201ENST00000613696 3585 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 SNORA71.1-201ENST00000364523 117 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 RNU6-660P-201ENST00000364566 109 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 SNORD116-9-201ENST00000384000 95 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 SNORD116-3-201ENST00000384287 95 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 SNORD116-7-201ENST00000384404 95 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 Y_RNA.493-201ENST00000384422 102 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 SNORD116-5-201ENST00000384462 95 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 Y_RNA.560-201ENST00000384689 102 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AL021407.1-201ENST00000404531 386 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 MIR1305-201ENST00000408300 86 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 MIR1302-8-201ENST00000408342 128 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 MIR1289-1-201ENST00000408836 144 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 RPL19P1-201ENST00000411635 428 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 MTATP6P27-201ENST00000416987 621 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 MTATP6P4-201ENST00000427725 675 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC244035.1-201ENST00000430042 390 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 RSU1P2-202ENST00000437884 485 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 RPS29P6-201ENST00000438196 145 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AL117351.1-201ENST00000438864 766 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC118469.1-201ENST00000442943 488 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC002381.1-201ENST00000447049 280 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 BX322784.1-201ENST00000455793 1077 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC104563.1-201ENST00000476147 376 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 RN7SL20P-201ENST00000488827 297 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC010625.1-201ENST00000511296 403 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 RNU6-27P-201ENST00000516146 107 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AP000857.1-201ENST00000532151 543 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 HSPE1P20-201ENST00000538133 289 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC022080.3-201ENST00000544433 482 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 OR6C7P-201ENST00000547875 934 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC107954.1-201ENST00000565906 727 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AP000403.1-201ENST00000603349 851 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 MTCYBP22-201ENST00000603788 447 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 PRELID3BP8-201ENST00000604148 295 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC008962.1-201ENST00000605729 304 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC092354.1-201ENST00000606057 376 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AL020991.1-201ENST00000612314 373 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC004696.1-201ENST00000614345 607 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC006111.3-201ENST00000622137 383 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC007494.3-201ENST00000624660 743 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AL161431.1-201ENST00000618966 4205 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 AC092447.10-201ENST00000620607 1652 ntBASIC2.68□□□□□ -1.98
ZNF544Q6NX49 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms