Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AL359385.1-201ENST00000456509 365 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 RNA5SP310-201ENST00000459084 116 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 RPL31P60-201ENST00000478450 367 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.32□□□□□ -1.72
LONRF3Q496Y0 RAC1P2-201ENST00000511164 579 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 RNA5SP208-201ENST00000516156 78 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 RPS3AP4-201ENST00000555161 764 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AL356432.3-201ENST00000568952 465 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 MIR3118-1-201ENST00000581787 76 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AC105224.1-201ENST00000587055 421 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AL161734.1-201ENST00000609720 557 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AC012150.2-201ENST00000621300 544 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AL356321.1-201ENST00000621360 228 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AC091953.2-201ENST00000623979 160 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AC019226.1-201ENST00000625666 515 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LONRF3Q496Y0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LONRF3Q496Y0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LONRF3Q496Y0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 RNU5E-8P-201ENST00000363502 116 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 CIR1P3-201ENST00000405137 479 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 HSPE1P8-201ENST00000406997 288 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 RN7SKP156-201ENST00000410308 342 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AC127391.1-201ENST00000411737 98 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 HMGN1P24-201ENST00000412282 298 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 MTND3P17-201ENST00000416968 344 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AL451062.2-201ENST00000427515 271 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 FCF1P1-201ENST00000432690 571 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 RPL35AP22-201ENST00000436855 335 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 MTATP6P30-201ENST00000443540 664 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 TPT1P14-201ENST00000448018 505 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 RPL21P11-201ENST00000461458 483 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AC010493.1-201ENST00000513479 292 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 SNORD59.2-201ENST00000516873 68 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AP001893.2-201ENST00000526949 202 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AP000907.2-201ENST00000530827 353 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AC099489.2-201ENST00000574976 260 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 SNORA59B-202ENST00000578183 701 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 MIR4444-1-201ENST00000581696 74 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 MIR4444-2-201ENST00000584390 74 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AL137849.1-201ENST00000604767 169 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AC009570.1-201ENST00000609599 745 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AL355073.2-201ENST00000612106 557 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AL133173.2-201ENST00000614270 90 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 MIR6076-201ENST00000617521 113 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 LRRC77P-213ENST00000637727 880 ntBASIC4.31□□□□□ -1.72
LONRF3Q496Y0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LONRF3Q496Y0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LONRF3Q496Y0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
LONRF3Q496Y0 OR5J1P-201ENST00000313544 939 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 Y_RNA.9-201ENST00000362354 101 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 RNU5E-1-201ENST00000362477 120 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 SNORA71.3-201ENST00000362582 128 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 Y_RNA.256-201ENST00000364594 104 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 SNORA73.2-201ENST00000364946 201 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 RNU6-1103P-201ENST00000384150 107 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 MIR200C-201ENST00000384980 68 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 RAB9AP3-201ENST00000412737 573 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 UBE2FP1-201ENST00000416536 447 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.3□□□□□ -1.72
LONRF3Q496Y0 TMEM167AP1-201ENST00000423409 219 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 PPP1R11P2-201ENST00000423543 382 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 AC019097.1-201ENST00000424783 735 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 AC008850.1-201ENST00000427546 362 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 AC133104.1-201ENST00000429100 218 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.3□□□□□ -1.72
LONRF3Q496Y0 RAB9AP1-201ENST00000449393 573 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 AC027673.1-201ENST00000456245 405 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 AC116353.2-201ENST00000505332 712 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.3□□□□□ -1.72
LONRF3Q496Y0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.3□□□□□ -1.72
LONRF3Q496Y0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.3□□□□□ -1.72
LONRF3Q496Y0 AC107934.1-201ENST00000522215 217 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.3□□□□□ -1.72
LONRF3Q496Y0 AL845331.3-202ENST00000562856 261 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms