Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 AP003717.3-201ENST00000544832 1180 ntBASIC1.87□□□□□ -2.11
CPSF1Q10570 AC084364.2-201ENST00000546924 395 ntBASIC1.87□□□□□ -2.11
CPSF1Q10570 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.87□□□□□ -2.11
CPSF1Q10570 AL354943.1-201ENST00000572103 781 ntBASIC1.87□□□□□ -2.11
CPSF1Q10570 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.87□□□□□ -2.11
CPSF1Q10570 AL356118.1-201ENST00000635272 1078 ntBASIC1.87□□□□□ -2.11
CPSF1Q10570 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.87□□□□□ -2.11
CPSF1Q10570 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CPSF1Q10570 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CPSF1Q10570 AL590084.1-201ENST00000407885 387 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 RPS15AP40-201ENST00000419621 391 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 RPL31P63-201ENST00000422565 375 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 RPS6P15-201ENST00000431996 751 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CPSF1Q10570 RABEPKP1-201ENST00000440529 1026 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 RPL23AP16-201ENST00000441715 421 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.86□□□□□ -2.11
CPSF1Q10570 RPL5P13-201ENST00000462840 709 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.86□□□□□ -2.11
CPSF1Q10570 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.86□□□□□ -2.11
CPSF1Q10570 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.86□□□□□ -2.11
CPSF1Q10570 AP004371.1-201ENST00000525240 214 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.86□□□□□ -2.11
CPSF1Q10570 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.86□□□□□ -2.11
CPSF1Q10570 AC008015.1-201ENST00000555505 465 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 AC023813.2-201ENST00000564321 469 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 AC090897.2-201ENST00000581715 130 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 MIR4452-201ENST00000583004 71 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.86□□□□□ -2.11
CPSF1Q10570 AC106791.2-201ENST00000604680 391 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 MIR6078-201ENST00000611069 100 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 RMST_2.1-201ENST00000617263 136 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 RMST_5.1-201ENST00000618704 126 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.86□□□□□ -2.11
CPSF1Q10570 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.86□□□□□ -2.11
CPSF1Q10570 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.86□□□□□ -2.11
CPSF1Q10570 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.86□□□□□ -2.11
CPSF1Q10570 MTCO1P4-201ENST00000520516 1409 ntBASIC1.86□□□□□ -2.11
CPSF1Q10570 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.85□□□□□ -2.11
CPSF1Q10570 MIR96-201ENST00000362288 78 ntBASIC1.85□□□□□ -2.11
CPSF1Q10570 MIR7-2-201ENST00000384970 110 ntBASIC1.85□□□□□ -2.11
CPSF1Q10570 AL023807.1-201ENST00000407932 359 ntBASIC1.85□□□□□ -2.11
CPSF1Q10570 AC244033.1-201ENST00000426826 870 ntBASIC1.85□□□□□ -2.11
CPSF1Q10570 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.85□□□□□ -2.11
CPSF1Q10570 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.85□□□□□ -2.11
CPSF1Q10570 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.85□□□□□ -2.11
CPSF1Q10570 NUTF2P8-201ENST00000604593 363 ntBASIC1.85□□□□□ -2.11
CPSF1Q10570 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.85□□□□□ -2.11
CPSF1Q10570 RNU2-21P-201ENST00000410368 188 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 AL136133.1-201ENST00000413694 376 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 AL606495.1-201ENST00000422100 813 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 RPL35AP22-201ENST00000436855 335 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 AP002345.1-201ENST00000456493 928 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.84□□□□□ -2.11
CPSF1Q10570 AL121594.1-201ENST00000475906 575 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 AL135752.1-201ENST00000479477 471 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 AC104685.1-201ENST00000502445 371 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 Y_RNA.675-201ENST00000516389 149 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.84□□□□□ -2.11
CPSF1Q10570 CASP1P1-201ENST00000526345 212 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 AP003033.1-201ENST00000527244 415 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 MTND2P26-201ENST00000528255 1029 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CPSF1Q10570 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CPSF1Q10570 AC011477.1-204ENST00000623416 1325 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 OR4G1P-203ENST00000641984 1631 ntBASIC1.84□□□□□ -2.11
CPSF1Q10570 SNORA40.6-201ENST00000391153 128 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 RPL31P20-201ENST00000449593 360 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.83□□□□□ -2.12
CPSF1Q10570 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CPSF1Q10570 AC105252.1-201ENST00000503089 286 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 ERHP1-201ENST00000523006 310 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.83□□□□□ -2.12
CPSF1Q10570 MIR7973-1-201ENST00000614683 76 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 AC011472.4-201ENST00000615848 491 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 AL162373.1-201ENST00000620433 407 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.83□□□□□ -2.12
CPSF1Q10570 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.83□□□□□ -2.12
CPSF1Q10570 AP000648.3-201ENST00000623539 4507 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CPSF1Q10570 RNU1-22P-201ENST00000363334 158 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 SNORD114-22-201ENST00000365423 72 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 SNORD56-201ENST00000413522 71 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 AL365400.1-201ENST00000431854 640 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 Z85994.2-201ENST00000434327 452 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 RNA5SP233-201ENST00000459153 113 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 OR5BM1P-201ENST00000512021 366 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 RNA5SP61-201ENST00000516453 100 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.83□□□□□ -2.12
CPSF1Q10570 AC006963.1-201ENST00000624003 1052 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 AC020923.1-201ENST00000624021 917 ntBASIC1.83□□□□□ -2.12
CPSF1Q10570 MIR17-201ENST00000385012 84 ntBASIC1.82□□□□□ -2.12
CPSF1Q10570 AL356379.1-201ENST00000414105 126 ntBASIC1.82□□□□□ -2.12
CPSF1Q10570 UBE2D3P2-201ENST00000424409 445 ntBASIC1.82□□□□□ -2.12
CPSF1Q10570 SNRPGP13-201ENST00000442212 177 ntBASIC1.82□□□□□ -2.12
CPSF1Q10570 AL031183.1-201ENST00000457667 207 ntBASIC1.82□□□□□ -2.12
CPSF1Q10570 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.82□□□□□ -2.12
CPSF1Q10570 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms