Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNU6-270P-201ENST00000364131 105 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 U8.9-201ENST00000365667 134 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 Y_RNA.578-201ENST00000390903 88 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 RNA5SP425-201ENST00000410336 112 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 AC007064.1-201ENST00000412238 351 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 AL161449.1-201ENST00000414531 1199 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.47□□□□□ -2.01
TNFSF9P41273 AL590383.1-201ENST00000428602 75 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.47□□□□□ -2.01
TNFSF9P41273 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TNFSF9P41273 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TNFSF9P41273 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.47□□□□□ -2.01
TNFSF9P41273 AC092155.2-201ENST00000454675 477 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 snoU13.26-201ENST00000459452 105 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.47□□□□□ -2.01
TNFSF9P41273 HSPA8P13-201ENST00000523715 472 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.47□□□□□ -2.01
TNFSF9P41273 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.47□□□□□ -2.01
TNFSF9P41273 HMGB1P14-201ENST00000557424 591 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 MIR3908-201ENST00000579798 126 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 MIR3670-2-201ENST00000582974 65 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 MIR3670-1-201ENST00000584160 65 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 MIR3670-3-201ENST00000584855 65 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 AC008507.2-201ENST00000588402 1176 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 AP001429.1-201ENST00000602568 530 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 AC004067.1-201ENST00000608733 700 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 MIR3670-4-201ENST00000612260 65 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 AC090132.2-201ENST00000615881 347 ntBASIC2.47□□□□□ -2.01
TNFSF9P41273 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
TNFSF9P41273 OR4G2P-202ENST00000641004 1759 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AC092447.7-201ENST00000422212 1621 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.46□□□□□ -2.02
TNFSF9P41273 CDR1-202ENST00000625883 1485 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
TNFSF9P41273 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TNFSF9P41273 MIR6073-201ENST00000352083 89 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 RNU6-28P-201ENST00000362378 107 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 RNU6-1176P-201ENST00000390955 107 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AL592310.1-201ENST00000414330 671 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AL139421.1-201ENST00000423010 169 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AC009414.1-201ENST00000427200 443 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AL512844.2-201ENST00000433990 593 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 TAAR7P-201ENST00000436141 242 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 RPL21P2-201ENST00000440049 481 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AL353705.4-201ENST00000449661 238 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.46□□□□□ -2.02
TNFSF9P41273 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.46□□□□□ -2.02
TNFSF9P41273 AC008571.1-201ENST00000467232 300 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.46□□□□□ -2.02
TNFSF9P41273 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.46□□□□□ -2.02
TNFSF9P41273 SEM1P1-201ENST00000506694 209 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 RNU6-1256P-201ENST00000516539 103 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 RNU6-826P-201ENST00000516827 104 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AC026241.1-201ENST00000517873 2142 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.46□□□□□ -2.02
TNFSF9P41273 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.46□□□□□ -2.02
TNFSF9P41273 DEFB130C-202ENST00000530001 230 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.46□□□□□ -2.02
TNFSF9P41273 AC105137.2-201ENST00000569073 466 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AC068135.2-201ENST00000569293 1028 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AC090615.1-201ENST00000577519 154 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.46□□□□□ -2.02
TNFSF9P41273 AC013553.2-201ENST00000604244 589 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AL136363.1-201ENST00000605349 337 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AL359198.2-201ENST00000611836 194 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AC004852.3-201ENST00000614131 326 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AL512427.1-201ENST00000618593 349 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 UCA1.1-201ENST00000620952 75 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
TNFSF9P41273 AP005901.5-201ENST00000545779 1796 ntBASIC2.46□□□□□ -2.02
TNFSF9P41273 AL356473.1-201ENST00000406203 1408 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TNFSF9P41273 RNU1-105P-201ENST00000363470 161 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 MIR221-201ENST00000385135 110 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 MIR767-201ENST00000390228 109 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 RNA5SP181-201ENST00000410246 98 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 RPL19P1-201ENST00000411635 428 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 SPA17P1-201ENST00000416656 452 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 AC018630.2-202ENST00000422992 927 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 AL139415.2-201ENST00000431968 163 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.45□□□□□ -2.02
TNFSF9P41273 FAM103A2P-201ENST00000444122 354 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 DDX3P2-201ENST00000446138 111 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.45□□□□□ -2.02
TNFSF9P41273 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.45□□□□□ -2.02
TNFSF9P41273 AC093677.1-201ENST00000514414 678 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 SNORA31.22-201ENST00000517204 135 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.45□□□□□ -2.02
TNFSF9P41273 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.45□□□□□ -2.02
TNFSF9P41273 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.45□□□□□ -2.02
TNFSF9P41273 AC009063.1-201ENST00000563342 702 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.45□□□□□ -2.02
TNFSF9P41273 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.45□□□□□ -2.02
TNFSF9P41273 AL022067.1-201ENST00000602426 454 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 AC019159.1-201ENST00000605094 187 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 AL390208.1-201ENST00000605885 644 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 AC124016.2-201ENST00000610058 665 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.45□□□□□ -2.02
TNFSF9P41273 AL596245.1-201ENST00000618994 362 ntBASIC2.45□□□□□ -2.02
TNFSF9P41273 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms