Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.4□□□□□ -1.87
RPL3P39023 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.4□□□□□ -1.87
RPL3P39023 TUG1_2.1-201ENST00000614234 87 ntBASIC3.4□□□□□ -1.87
RPL3P39023 AL391261.4-201ENST00000616012 481 ntBASIC3.4□□□□□ -1.87
RPL3P39023 AC015967.1-201ENST00000619893 476 ntBASIC3.4□□□□□ -1.87
RPL3P39023 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.4□□□□□ -1.87
RPL3P39023 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPL3P39023 AC058791.1-201ENST00000608412 3198 ntBASIC3.4□□□□□ -1.87
RPL3P39023 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPL3P39023 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RPL3P39023 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPL3P39023 AC106871.1-201ENST00000568324 3102 ntBASIC3.39□□□□□ -1.87
RPL3P39023 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RPL3P39023 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.39□□□□□ -1.87
RPL3P39023 RNU6-1097P-201ENST00000363586 107 ntBASIC3.39□□□□□ -1.87
RPL3P39023 RNU6-335P-201ENST00000364563 113 ntBASIC3.39□□□□□ -1.87
RPL3P39023 Y_RNA.453-201ENST00000384223 109 ntBASIC3.39□□□□□ -1.87
RPL3P39023 RNY3P14-201ENST00000384309 102 ntBASIC3.39□□□□□ -1.87
RPL3P39023 SNORD3H-201ENST00000384486 214 ntBASIC3.39□□□□□ -1.87
RPL3P39023 RNU6-278P-201ENST00000390945 109 ntBASIC3.39□□□□□ -1.87
RPL3P39023 RN7SKP159-201ENST00000410657 292 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.39□□□□□ -1.87
RPL3P39023 USP9YP6-201ENST00000413550 854 ntBASIC3.39□□□□□ -1.87
RPL3P39023 UBE2FP1-201ENST00000416536 447 ntBASIC3.39□□□□□ -1.87
RPL3P39023 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.39□□□□□ -1.87
RPL3P39023 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.39□□□□□ -1.87
RPL3P39023 MTCO1P20-201ENST00000425366 358 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.39□□□□□ -1.87
RPL3P39023 AC004866.2-201ENST00000438285 481 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.39□□□□□ -1.87
RPL3P39023 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.39□□□□□ -1.87
RPL3P39023 AL357552.1-201ENST00000445254 415 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.39□□□□□ -1.87
RPL3P39023 NFU1P2-201ENST00000448700 469 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AC140076.1-201ENST00000449897 361 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.39□□□□□ -1.87
RPL3P39023 SNRPGP6-201ENST00000451124 220 ntBASIC3.39□□□□□ -1.87
RPL3P39023 RPL23AP67-201ENST00000465341 474 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.39□□□□□ -1.87
RPL3P39023 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.39□□□□□ -1.87
RPL3P39023 HMGN1P11-201ENST00000508668 303 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AC026402.1-201ENST00000513642 170 ntBASIC3.39□□□□□ -1.87
RPL3P39023 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.39□□□□□ -1.87
RPL3P39023 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.39□□□□□ -1.87
RPL3P39023 SNORA31.20-201ENST00000517111 133 ntBASIC3.39□□□□□ -1.87
RPL3P39023 SNORA31.22-201ENST00000517204 135 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AP006245.1-201ENST00000522549 120 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.39□□□□□ -1.87
RPL3P39023 AL359212.1-201ENST00000556608 614 ntBASIC3.39□□□□□ -1.87
RPL3P39023 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.39□□□□□ -1.87
RPL3P39023 AC025678.1-201ENST00000567861 338 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AC098848.2-201ENST00000588023 330 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.39□□□□□ -1.87
RPL3P39023 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.39□□□□□ -1.87
RPL3P39023 AL049634.3-201ENST00000604968 457 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AC093788.1-201ENST00000609356 927 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.39□□□□□ -1.87
RPL3P39023 uc_338.32-201ENST00000615087 172 ntBASIC3.39□□□□□ -1.87
RPL3P39023 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.39□□□□□ -1.87
RPL3P39023 AL603758.1-201ENST00000618654 241 ntBASIC3.39□□□□□ -1.87
RPL3P39023 AC022149.2-201ENST00000621061 203 ntBASIC3.39□□□□□ -1.87
RPL3P39023 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.39□□□□□ -1.87
RPL3P39023 MIR1321-201ENST00000637766 79 ntBASIC3.39□□□□□ -1.87
RPL3P39023 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.39□□□□□ -1.87
RPL3P39023 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RPL3P39023 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPL3P39023 USP8P1-201ENST00000494673 3183 ntBASIC3.39□□□□□ -1.87
RPL3P39023 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RPL3P39023 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RPL3P39023 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPL3P39023 AC004520.1-201ENST00000608362 1413 ntBASIC3.38□□□□□ -1.87
RPL3P39023 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.38□□□□□ -1.87
RPL3P39023 RNU6-534P-201ENST00000364877 106 ntBASIC3.38□□□□□ -1.87
RPL3P39023 Y_RNA.367-201ENST00000365544 101 ntBASIC3.38□□□□□ -1.87
RPL3P39023 RNU6-1074P-201ENST00000383995 104 ntBASIC3.38□□□□□ -1.87
RPL3P39023 MIR558-201ENST00000384920 94 ntBASIC3.38□□□□□ -1.87
RPL3P39023 RNU6-1158P-201ENST00000391167 107 ntBASIC3.38□□□□□ -1.87
RPL3P39023 RN7SKP285-201ENST00000410137 318 ntBASIC3.38□□□□□ -1.87
RPL3P39023 PPP1R11P2-201ENST00000423543 382 ntBASIC3.38□□□□□ -1.87
RPL3P39023 RPL7P2-201ENST00000427639 268 ntBASIC3.38□□□□□ -1.87
RPL3P39023 OR2AS1P-201ENST00000427827 319 ntBASIC3.38□□□□□ -1.87
RPL3P39023 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.38□□□□□ -1.87
RPL3P39023 USP9YP7-201ENST00000436723 430 ntBASIC3.38□□□□□ -1.87
RPL3P39023 RPL7P54-201ENST00000438336 674 ntBASIC3.38□□□□□ -1.87
RPL3P39023 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.38□□□□□ -1.87
RPL3P39023 RPS3AP46-201ENST00000448352 682 ntBASIC3.38□□□□□ -1.87
RPL3P39023 USP9YP32-201ENST00000452432 430 ntBASIC3.38□□□□□ -1.87
RPL3P39023 SNORD105B-201ENST00000458770 79 ntBASIC3.38□□□□□ -1.87
RPL3P39023 AC084357.1-201ENST00000473404 255 ntBASIC3.38□□□□□ -1.87
RPL3P39023 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.38□□□□□ -1.87
RPL3P39023 AC093278.1-201ENST00000494700 600 ntBASIC3.38□□□□□ -1.87
RPL3P39023 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.38□□□□□ -1.87
RPL3P39023 HSPD1P15-201ENST00000505573 1122 ntBASIC3.38□□□□□ -1.87
RPL3P39023 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.38□□□□□ -1.87
RPL3P39023 Vault.1-201ENST00000516474 102 ntBASIC3.38□□□□□ -1.87
RPL3P39023 SNORA70.19-201ENST00000516717 90 ntBASIC3.38□□□□□ -1.87
RPL3P39023 RNU6-410P-201ENST00000517006 107 ntBASIC3.38□□□□□ -1.87
RPL3P39023 FAM60DP-201ENST00000524174 632 ntBASIC3.38□□□□□ -1.87
RPL3P39023 AC109635.3-201ENST00000529536 185 ntBASIC3.38□□□□□ -1.87
RPL3P39023 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms