Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNU6-1316P-201ENST00000384242 108 ntBASIC2.96□□□□□ -1.94
SHC1P29353 MT-TC-201ENST00000387405 66 ntBASIC2.96□□□□□ -1.94
SHC1P29353 RNU6-837P-201ENST00000391056 108 ntBASIC2.96□□□□□ -1.94
SHC1P29353 SNORD115.1-201ENST00000391109 76 ntBASIC2.96□□□□□ -1.94
SHC1P29353 RPS3AP36-201ENST00000398190 775 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AL357075.1-201ENST00000404107 726 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AL583834.1-201ENST00000406943 343 ntBASIC2.96□□□□□ -1.94
SHC1P29353 Y_RNA.604-201ENST00000410574 102 ntBASIC2.96□□□□□ -1.94
SHC1P29353 RNU6-195P-201ENST00000411352 109 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.96□□□□□ -1.94
SHC1P29353 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.96□□□□□ -1.94
SHC1P29353 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.96□□□□□ -1.94
SHC1P29353 AC007742.1-201ENST00000425789 329 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AL035410.1-201ENST00000427409 427 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.96□□□□□ -1.94
SHC1P29353 AL596276.1-201ENST00000434465 418 ntBASIC2.96□□□□□ -1.94
SHC1P29353 MTCYBP45-201ENST00000435243 565 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AC009961.2-201ENST00000435771 251 ntBASIC2.96□□□□□ -1.94
SHC1P29353 ELOCP26-201ENST00000436067 329 ntBASIC2.96□□□□□ -1.94
SHC1P29353 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.96□□□□□ -1.94
SHC1P29353 RBMX2P4-201ENST00000441256 376 ntBASIC2.96□□□□□ -1.94
SHC1P29353 HSPE1P28-201ENST00000443139 211 ntBASIC2.96□□□□□ -1.94
SHC1P29353 Z75741.1-201ENST00000446793 314 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AC003071.1-201ENST00000451219 789 ntBASIC2.96□□□□□ -1.94
SHC1P29353 snoU13.22-201ENST00000459428 104 ntBASIC2.96□□□□□ -1.94
SHC1P29353 VN1R17P-201ENST00000472048 1090 ntBASIC2.96□□□□□ -1.94
SHC1P29353 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
SHC1P29353 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.96□□□□□ -1.94
SHC1P29353 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.96□□□□□ -1.94
SHC1P29353 RPL23AP55-201ENST00000498163 452 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.96□□□□□ -1.94
SHC1P29353 RNU6-314P-201ENST00000516574 104 ntBASIC2.96□□□□□ -1.94
SHC1P29353 RNU2-46P-201ENST00000517038 113 ntBASIC2.96□□□□□ -1.94
SHC1P29353 RNU6-430P-201ENST00000517078 107 ntBASIC2.96□□□□□ -1.94
SHC1P29353 RNA5SP380-201ENST00000517190 98 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AC245166.1-201ENST00000521012 253 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AP003181.2-201ENST00000528941 181 ntBASIC2.96□□□□□ -1.94
SHC1P29353 DEFB108A-201ENST00000530110 222 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AP003385.6-201ENST00000531603 374 ntBASIC2.96□□□□□ -1.94
SHC1P29353 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.96□□□□□ -1.94
SHC1P29353 TRAV37-201ENST00000553906 342 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AL157394.1-201ENST00000562983 1224 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.96□□□□□ -1.94
SHC1P29353 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.96□□□□□ -1.94
SHC1P29353 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.96□□□□□ -1.94
SHC1P29353 MIR3690-201ENST00000580266 75 ntBASIC2.96□□□□□ -1.94
SHC1P29353 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
SHC1P29353 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.96□□□□□ -1.94
SHC1P29353 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.96□□□□□ -1.94
SHC1P29353 BBIP1P1-201ENST00000602999 279 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AL390208.1-201ENST00000605885 644 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AC080013.4-201ENST00000607624 649 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AC006023.2-201ENST00000609916 167 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AC099778.2-201ENST00000610904 211 ntBASIC2.96□□□□□ -1.94
SHC1P29353 AC090517.2-201ENST00000614966 680 ntBASIC2.96□□□□□ -1.94
SHC1P29353 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SHC1P29353 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.96□□□□□ -1.94
SHC1P29353 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.96□□□□□ -1.94
SHC1P29353 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHC1P29353 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHC1P29353 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.96□□□□□ -1.94
SHC1P29353 AL079305.1-201ENST00000623159 3008 ntBASIC2.95□□□□□ -1.94
SHC1P29353 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SHC1P29353 AP001350.1-201ENST00000601906 1524 ntBASIC2.95□□□□□ -1.94
SHC1P29353 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SHC1P29353 SNORD46.1-201ENST00000364139 104 ntBASIC2.95□□□□□ -1.94
SHC1P29353 RNA5SP72-201ENST00000364442 117 ntBASIC2.95□□□□□ -1.94
SHC1P29353 RNY4P34-201ENST00000364779 95 ntBASIC2.95□□□□□ -1.94
SHC1P29353 MIR34B-201ENST00000385076 84 ntBASIC2.95□□□□□ -1.94
SHC1P29353 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SHC1P29353 RPL17P50-201ENST00000396131 546 ntBASIC2.95□□□□□ -1.94
SHC1P29353 RNA5SP229-201ENST00000410809 99 ntBASIC2.95□□□□□ -1.94
SHC1P29353 MTND4LP11-201ENST00000422184 280 ntBASIC2.95□□□□□ -1.94
SHC1P29353 MTCO2P5-201ENST00000422621 426 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.95□□□□□ -1.94
SHC1P29353 AL589872.1-201ENST00000426602 288 ntBASIC2.95□□□□□ -1.94
SHC1P29353 PSMA6P3-201ENST00000428242 164 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AL590233.1-201ENST00000430017 456 ntBASIC2.95□□□□□ -1.94
SHC1P29353 UBE2V1P8-201ENST00000437166 265 ntBASIC2.95□□□□□ -1.94
SHC1P29353 HMGB1P12-201ENST00000438594 598 ntBASIC2.95□□□□□ -1.94
SHC1P29353 MTATP6P23-201ENST00000440153 476 ntBASIC2.95□□□□□ -1.94
SHC1P29353 FAM103A2P-201ENST00000444122 354 ntBASIC2.95□□□□□ -1.94
SHC1P29353 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.95□□□□□ -1.94
SHC1P29353 RPL21P104-201ENST00000464143 478 ntBASIC2.95□□□□□ -1.94
SHC1P29353 RPS4XP13-201ENST00000483219 789 ntBASIC2.95□□□□□ -1.94
SHC1P29353 MTND1P3-201ENST00000484956 952 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.95□□□□□ -1.94
SHC1P29353 AC112204.1-201ENST00000502591 103 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AC093767.1-201ENST00000504523 156 ntBASIC2.95□□□□□ -1.94
SHC1P29353 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.95□□□□□ -1.94
SHC1P29353 AC022483.1-201ENST00000514020 567 ntBASIC2.95□□□□□ -1.94
SHC1P29353 RNA5SP217-201ENST00000515959 91 ntBASIC2.95□□□□□ -1.94
SHC1P29353 RNU6-718P-201ENST00000516166 105 ntBASIC2.95□□□□□ -1.94
SHC1P29353 MTCO2P4-201ENST00000517968 247 ntBASIC2.95□□□□□ -1.94
SHC1P29353 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.95□□□□□ -1.94
SHC1P29353 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SHC1P29353 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.95□□□□□ -1.94
SHC1P29353 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SHC1P29353 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms