Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 RPS3AP46-201ENST00000448352 682 ntBASIC3.42□□□□□ -1.86
LDB3O75112 FDX1P2-201ENST00000450769 375 ntBASIC3.42□□□□□ -1.86
LDB3O75112 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.42□□□□□ -1.86
LDB3O75112 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.42□□□□□ -1.86
LDB3O75112 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.42□□□□□ -1.86
LDB3O75112 PMCHL2-203ENST00000457791 237 ntBASIC3.42□□□□□ -1.86
LDB3O75112 RPL39P36-201ENST00000490784 156 ntBASIC3.42□□□□□ -1.86
LDB3O75112 AC020593.1-201ENST00000507399 299 ntBASIC3.42□□□□□ -1.86
LDB3O75112 RNU1-95P-201ENST00000516357 160 ntBASIC3.42□□□□□ -1.86
LDB3O75112 RNU1-128P-201ENST00000516704 160 ntBASIC3.42□□□□□ -1.86
LDB3O75112 SNORA31.20-201ENST00000517111 133 ntBASIC3.42□□□□□ -1.86
LDB3O75112 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.42□□□□□ -1.86
LDB3O75112 AF235103.2-201ENST00000525753 346 ntBASIC3.42□□□□□ -1.86
LDB3O75112 AC109635.4-202ENST00000531666 412 ntBASIC3.42□□□□□ -1.86
LDB3O75112 CR383656.7-201ENST00000548164 174 ntBASIC3.42□□□□□ -1.86
LDB3O75112 HIF1AP1-201ENST00000553642 175 ntBASIC3.42□□□□□ -1.86
LDB3O75112 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.42□□□□□ -1.86
LDB3O75112 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.42□□□□□ -1.86
LDB3O75112 AL138976.2-201ENST00000563989 694 ntBASIC3.42□□□□□ -1.86
LDB3O75112 AC099489.2-201ENST00000574976 260 ntBASIC3.42□□□□□ -1.86
LDB3O75112 MIR3167-201ENST00000579623 85 ntBASIC3.42□□□□□ -1.86
LDB3O75112 MIR3118-1-201ENST00000581787 76 ntBASIC3.42□□□□□ -1.86
LDB3O75112 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB3O75112 XIAPP1-201ENST00000603162 600 ntBASIC3.42□□□□□ -1.86
LDB3O75112 AC245014.2-201ENST00000603689 287 ntBASIC3.42□□□□□ -1.86
LDB3O75112 AC007363.1-201ENST00000604736 620 ntBASIC3.42□□□□□ -1.86
LDB3O75112 AC246785.4-201ENST00000605374 287 ntBASIC3.42□□□□□ -1.86
LDB3O75112 AC121334.2-201ENST00000605387 271 ntBASIC3.42□□□□□ -1.86
LDB3O75112 MIR98-201ENST00000606724 119 ntBASIC3.42□□□□□ -1.86
LDB3O75112 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB3O75112 AC039056.2-201ENST00000622261 511 ntBASIC3.42□□□□□ -1.86
LDB3O75112 AL356585.4-201ENST00000623078 1229 ntBASIC3.42□□□□□ -1.86
LDB3O75112 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB3O75112 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.42□□□□□ -1.86
LDB3O75112 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LDB3O75112 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB3O75112 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
LDB3O75112 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB3O75112 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
LDB3O75112 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LDB3O75112 AC007823.1-201ENST00000569932 1566 ntBASIC3.42□□□□□ -1.86
LDB3O75112 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LDB3O75112 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
LDB3O75112 AC004925.1-201ENST00000624256 2706 ntBASIC3.42□□□□□ -1.86
LDB3O75112 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.42□□□□□ -1.86
LDB3O75112 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.42□□□□□ -1.86
LDB3O75112 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
LDB3O75112 MTND4P23-201ENST00000447723 1363 ntBASIC3.41□□□□□ -1.86
LDB3O75112 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
LDB3O75112 Y_RNA.279-201ENST00000364763 95 ntBASIC3.41□□□□□ -1.86
LDB3O75112 RNA5SP235-201ENST00000365411 114 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AL359837.1-201ENST00000381357 287 ntBASIC3.41□□□□□ -1.86
LDB3O75112 RNU6-877P-201ENST00000383868 107 ntBASIC3.41□□□□□ -1.86
LDB3O75112 Y_RNA.529-201ENST00000384586 119 ntBASIC3.41□□□□□ -1.86
LDB3O75112 Y_RNA.548-201ENST00000384656 105 ntBASIC3.41□□□□□ -1.86
LDB3O75112 RNU6-712P-201ENST00000410558 100 ntBASIC3.41□□□□□ -1.86
LDB3O75112 RNU2-8P-201ENST00000410727 190 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.41□□□□□ -1.86
LDB3O75112 AC092447.6-201ENST00000414578 210 ntBASIC3.41□□□□□ -1.86
LDB3O75112 MTCO3P12-201ENST00000416718 547 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.41□□□□□ -1.86
LDB3O75112 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.41□□□□□ -1.86
LDB3O75112 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.41□□□□□ -1.86
LDB3O75112 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.41□□□□□ -1.86
LDB3O75112 AC018644.1-201ENST00000429934 551 ntBASIC3.41□□□□□ -1.86
LDB3O75112 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.41□□□□□ -1.86
LDB3O75112 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LDB3O75112 RPL7P54-201ENST00000438336 674 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AL049734.2-201ENST00000441066 616 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.41□□□□□ -1.86
LDB3O75112 AC010285.1-201ENST00000470580 392 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AC092451.1-201ENST00000480211 153 ntBASIC3.41□□□□□ -1.86
LDB3O75112 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LDB3O75112 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.41□□□□□ -1.86
LDB3O75112 AC017037.2-201ENST00000513850 890 ntBASIC3.41□□□□□ -1.86
LDB3O75112 RNU6-1281P-201ENST00000516223 105 ntBASIC3.41□□□□□ -1.86
LDB3O75112 MIR2114-201ENST00000516645 80 ntBASIC3.41□□□□□ -1.86
LDB3O75112 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.41□□□□□ -1.86
LDB3O75112 AC107934.1-201ENST00000522215 217 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AP000907.2-201ENST00000530827 353 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.41□□□□□ -1.86
LDB3O75112 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.41□□□□□ -1.86
LDB3O75112 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.41□□□□□ -1.86
LDB3O75112 NRBF2P1-201ENST00000587407 859 ntBASIC3.41□□□□□ -1.86
LDB3O75112 UBE2L4-201ENST00000587688 464 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.41□□□□□ -1.86
LDB3O75112 KLKP1-201ENST00000595979 403 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AC068790.3-201ENST00000602988 553 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AL031176.1-201ENST00000604554 466 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.41□□□□□ -1.86
LDB3O75112 AL355472.4-201ENST00000610233 626 ntBASIC3.41□□□□□ -1.86
LDB3O75112 BX664608.1-201ENST00000610519 487 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AC135507.2-201ENST00000612443 309 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AL158801.5-201ENST00000623123 465 ntBASIC3.41□□□□□ -1.86
LDB3O75112 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.41□□□□□ -1.86
LDB3O75112 AC244205.2-202ENST00000635781 342 ntBASIC3.41□□□□□ -1.86
LDB3O75112 AC024614.3-201ENST00000637860 256 ntBASIC3.41□□□□□ -1.86
LDB3O75112 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LDB3O75112 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.41□□□□□ -1.86
LDB3O75112 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms