Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AL355836.1-201ENST00000555951 870 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 AC113139.1-201ENST00000605049 239 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXN1O15353 AC134503.1-201ENST00000633048 54 ntBASIC4.4□□□□□ -1.71
FOXN1O15353 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
FOXN1O15353 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXN1O15353 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXN1O15353 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.4□□□□□ -1.71
FOXN1O15353 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.4□□□□□ -1.71
FOXN1O15353 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
FOXN1O15353 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
FOXN1O15353 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXN1O15353 OR56A5-201ENST00000340110 738 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 RNU6-289P-201ENST00000364093 107 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
FOXN1O15353 SNORA69-201ENST00000383895 132 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 RNU6-1160P-201ENST00000384546 104 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 MIR506-201ENST00000384998 124 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 AL162578.1-201ENST00000406202 378 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 AC127391.1-201ENST00000411737 98 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 MRPL50P2-201ENST00000416821 482 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXN1O15353 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXN1O15353 AL606489.2-201ENST00000433886 234 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXN1O15353 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXN1O15353 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXN1O15353 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXN1O15353 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXN1O15353 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXN1O15353 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXN1O15353 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
FOXN1O15353 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXN1O15353 RNA5SP401-201ENST00000515920 127 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 HIGD1AP6-201ENST00000521833 279 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXN1O15353 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXN1O15353 OR5B19P-201ENST00000531766 928 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 AC023050.3-201ENST00000541142 333 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXN1O15353 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.39□□□□□ -1.71
FOXN1O15353 AC093249.1-201ENST00000567049 203 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXN1O15353 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXN1O15353 AL133215.3-201ENST00000609801 448 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 MIR7106-201ENST00000612419 65 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXN1O15353 AL133173.2-201ENST00000614270 90 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.39□□□□□ -1.71
FOXN1O15353 LINC02471-203ENST00000641941 4752 ntBASIC4.39□□□□□ -1.71
FOXN1O15353 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXN1O15353 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXN1O15353 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXN1O15353 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.38□□□□□ -1.71
FOXN1O15353 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN1O15353 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN1O15353 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXN1O15353 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN1O15353 RNU6-115P-201ENST00000364310 107 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 RNU6-7-201ENST00000364784 107 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 RNU6-8-201ENST00000365467 107 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 RNU6-74P-201ENST00000384235 107 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 RNU6-907P-201ENST00000390924 102 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXN1O15353 RPS4XP8-201ENST00000402039 771 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 MIR548P-201ENST00000408336 84 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 RN7SKP266-201ENST00000410232 287 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 RNU6-373P-201ENST00000411247 98 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 RNU2-6P-201ENST00000411404 190 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 RPL7AP73-201ENST00000413490 353 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.38□□□□□ -1.71
FOXN1O15353 AC099336.2-201ENST00000422457 254 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 MTCO3P46-201ENST00000425787 232 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 OR51AB1P-201ENST00000429046 620 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 RPL36AP53-201ENST00000432891 316 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 IPO7P1-201ENST00000442031 636 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXN1O15353 AC006480.1-201ENST00000449887 378 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 AC099560.2-201ENST00000457554 255 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.38□□□□□ -1.71
FOXN1O15353 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN1O15353 RPS15AP36-201ENST00000492022 382 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 RNA5SP341-201ENST00000516261 117 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 RNU6-1003P-201ENST00000517099 105 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 AC107953.1-201ENST00000522216 297 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 AC135001.1-201ENST00000544546 283 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXN1O15353 AC090877.1-201ENST00000561418 344 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 HMGB1P50-201ENST00000605814 607 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 RNU6-87P-201ENST00000607561 108 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 uc_338.5-201ENST00000611839 155 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 DISC2.1-201ENST00000612827 205 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 AC009248.2-201ENST00000619826 254 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 AP001005.3-201ENST00000622049 129 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.38□□□□□ -1.71
FOXN1O15353 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXN1O15353 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXN1O15353 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms