Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 SNORA14A-201ENST00000364773 135 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 SNORD15B-201ENST00000384714 146 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NPHP1O15259 VPS26BP1-201ENST00000417155 755 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.98□□□□□ -1.77
NPHP1O15259 RPS15AP6-201ENST00000420703 385 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHP1O15259 RPL37P21-201ENST00000435890 276 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 GDI2P2-201ENST00000445131 608 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHP1O15259 MTCO1P42-201ENST00000457379 726 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 AC010468.1-201ENST00000461022 817 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 AL135752.1-201ENST00000479477 471 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHP1O15259 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHP1O15259 RN7SKP60-201ENST00000516985 239 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHP1O15259 AP000907.2-201ENST00000530827 353 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
NPHP1O15259 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.98□□□□□ -1.77
NPHP1O15259 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.98□□□□□ -1.77
NPHP1O15259 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.98□□□□□ -1.77
NPHP1O15259 MIR2682-201ENST00000580305 110 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 MIR3609-201ENST00000582661 80 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 AF038458.1-201ENST00000588406 262 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 AC068790.3-201ENST00000602988 553 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 MTCYBP22-201ENST00000603788 447 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 AL033523.1-201ENST00000605153 153 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.98□□□□□ -1.77
NPHP1O15259 uc_338.25-201ENST00000613756 156 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 SDR42E1P2-201ENST00000614861 481 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 AC079248.2-201ENST00000623779 326 ntBASIC3.98□□□□□ -1.77
NPHP1O15259 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPHP1O15259 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
NPHP1O15259 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NPHP1O15259 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
NPHP1O15259 MIR325-201ENST00000385260 98 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 RNA5SP252-201ENST00000391131 119 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 RNU1-101P-201ENST00000391171 127 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 RN7SKP140-201ENST00000411196 284 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NPHP1O15259 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.97□□□□□ -1.77
NPHP1O15259 MTND4P20-201ENST00000424125 869 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 AL390023.1-201ENST00000428836 262 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 CST9LP2-201ENST00000437612 320 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.97□□□□□ -1.77
NPHP1O15259 AL049734.2-201ENST00000441066 616 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 CBWD4P-201ENST00000445695 655 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.97□□□□□ -1.77
NPHP1O15259 RNU7-125P-201ENST00000458760 62 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 RNU7-59P-201ENST00000459101 61 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 AC008481.1-201ENST00000463278 396 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 AC068587.2-201ENST00000478386 781 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 AC005178.1-201ENST00000508392 440 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 CDC42P4-201ENST00000510507 563 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 RNU6-1003P-201ENST00000517099 105 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 TGIF1P1-201ENST00000558095 802 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 PCMTD1P2-201ENST00000565017 355 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 ACTR3BP3-201ENST00000565577 979 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.97□□□□□ -1.77
NPHP1O15259 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NPHP1O15259 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.97□□□□□ -1.77
NPHP1O15259 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.97□□□□□ -1.77
NPHP1O15259 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.97□□□□□ -1.77
NPHP1O15259 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
NPHP1O15259 OR5H6-203ENST00000642105 978 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NPHP1O15259 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NPHP1O15259 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NPHP1O15259 AC004972.1-201ENST00000623934 2209 ntBASIC3.97□□□□□ -1.77
NPHP1O15259 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.96□□□□□ -1.78
NPHP1O15259 AC007785.2-201ENST00000598627 1916 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 Y_RNA.46-201ENST00000362695 102 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPHP1O15259 AP002088.1-201ENST00000382740 395 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 SNORA7.4-201ENST00000384249 137 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 RNU5A-2P-201ENST00000384337 116 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 AL354719.1-201ENST00000406535 843 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 EEF1A1P41-201ENST00000414667 207 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 AL451054.2-201ENST00000420896 202 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 HSPE1P1-201ENST00000421494 318 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 RPL31P12-201ENST00000422587 358 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.96□□□□□ -1.78
NPHP1O15259 RPL23AP82-202ENST00000427528 469 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.96□□□□□ -1.78
NPHP1O15259 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.96□□□□□ -1.78
NPHP1O15259 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.96□□□□□ -1.78
NPHP1O15259 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.96□□□□□ -1.78
NPHP1O15259 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.96□□□□□ -1.78
NPHP1O15259 CENPBD1P1-201ENST00000464061 469 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 AC004924.1-201ENST00000480160 781 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 AC068724.1-201ENST00000487100 792 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 KCTD9P5-201ENST00000504141 1170 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.96□□□□□ -1.78
NPHP1O15259 AC118465.1-201ENST00000513820 1271 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 IGHV3-76-201ENST00000522465 295 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.96□□□□□ -1.78
NPHP1O15259 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.96□□□□□ -1.78
NPHP1O15259 AC091489.2-201ENST00000566263 604 ntBASIC3.96□□□□□ -1.78
NPHP1O15259 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms